Evidence map›Paper›PMID 27392643›Full record

ArticleDie Naturwissenschaften2016

Characterization of irritans mariner-like elements in the olive fruit fly Bactrocera oleae (Diptera: Tephritidae): evolutionary implications.

Wafa Ben Lazhar-Ajroud, Aurore Caruso, Maha Mezghani, Maryem Bouallegue, Emmanuelle Tastard, Françoise Denis, Jacques-Deric Rouault, Hanem Makni, Pierre Capy, Benoît Chénais and 2 more

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Article in Die Naturwissenschaften, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Wafa Ben Lazhar-AjroudUR Génomique des Insectes Ravageurs des Cultures d'Intérêt Agronomique (UR11ES10), Faculté des Sciences de Tunis, Université de Tunis El-Manar, 2092, El Manar, Tunisia.
Aurore CarusoLaboratoire Mer-Molécules-Santé (EA 2160 MMS), Université du Maine, Avenue Olivier Messiaen, 72085, Le Mans, France.
Maha MezghaniUR Génomique des Insectes Ravageurs des Cultures d'Intérêt Agronomique (UR11ES10), Faculté des Sciences de Tunis, Université de Tunis El-Manar, 2092, El Manar, Tunisia.
Maryem BouallegueUR Génomique des Insectes Ravageurs des Cultures d'Intérêt Agronomique (UR11ES10), Faculté des Sciences de Tunis, Université de Tunis El-Manar, 2092, El Manar, Tunisia.
Emmanuelle TastardLaboratoire Mer-Molécules-Santé (EA 2160 MMS), Université du Maine, Avenue Olivier Messiaen, 72085, Le Mans, France.
Françoise DenisLaboratoire Mer-Molécules-Santé (EA 2160 MMS), Université du Maine, Avenue Olivier Messiaen, 72085, Le Mans, France.
Jacques-Deric RouaultLaboratoire EGCE, UPR 9034 CNRS, Avenue de la Terrasse, 91198, Gif-sur-Yvette, France.
Hanem MakniUR Génomique des Insectes Ravageurs des Cultures d'Intérêt Agronomique (UR11ES10), Faculté des Sciences de Tunis, Université de Tunis El-Manar, 2092, El Manar, Tunisia.
Pierre CapyLaboratoire EGCE, UPR 9034 CNRS, Avenue de la Terrasse, 91198, Gif-sur-Yvette, France.
Benoît ChénaisLaboratoire Mer-Molécules-Santé (EA 2160 MMS), Université du Maine, Avenue Olivier Messiaen, 72085, Le Mans, France. bchenais@univ-lemans.fr.ORCID http://orcid.org/0000-0003-2441-1966
Mohamed MakniUR Génomique des Insectes Ravageurs des Cultures d'Intérêt Agronomique (UR11ES10), Faculté des Sciences de Tunis, Université de Tunis El-Manar, 2092, El Manar, Tunisia.
Nathalie CasseLaboratoire Mer-Molécules-Santé (EA 2160 MMS), Université du Maine, Avenue Olivier Messiaen, 72085, Le Mans, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Genomic variation among species is commonly driven by transposable element (TE) invasion; thus, the pattern of TEs in a genome allows drawing an evolutionary history of the studied species. This paper reports in vitro and in silico detection and characterization of irritans mariner-like elements (MLEs) in the genome and transcriptome of Bactrocera oleae (Rossi) (Diptera: Tephritidae). Eleven irritans MLE sequences have been isolated in vitro using terminal inverted repeats (TIRs) as primers, and 215 have been extracted in silico from the sequenced genome of B. oleae. Additionally, the sequenced genomes of Bactrocera tryoni (Froggatt) and Bactrocera cucurbitae (Diptera: Tephritidae) have been explored to identify irritans MLEs. A total of 129 sequences from B. tryoni have been extracted, while the genome of B. cucurbitae appears probably devoid of irritans MLEs. All detected irritans MLEs are defective due to several mutations and are clustered together in a monophyletic group suggesting a common ancestor. The evolutionary history and dynamics of these TEs are discussed in relation with the phylogenetic distribution of their hosts. The knowledge on the structure, distribution, dynamic, and evolution of irritans MLEs in Bactrocera species contributes to the understanding of both their evolutionary history and the invasion history of their hosts. This could also be the basis for genetic control strategies using transposable elements.

Indexed as

PhylogenyAnimalsComputer SimulationDNA Transposable ElementsGenome, InsectMutationTephritidaeTerminal Repeat SequencesDNA Transposable ElementsBactrocera genusBactrocera oleaeIrritans mariner-like elementsTransposons

Identifiers

PMID27392643

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.