Evidence map›Paper›PMID 27391421›Full record

ArticleMicrobial drug resistance (Larchmont, N.Y.)2017

Occurrence of Mutations in the Antimicrobial Target Genes Related to Levofloxacin, Clarithromycin, and Amoxicillin Resistance in Helicobacter pylori Isolates from Buenos Aires City.

Gerardo Zerbetto De Palma, Nicolas Mendiondo, Andrés Wonaga, Luis Viola, Daniela Ibarra, Esteban Campitelli, Nicolas Salim, Rodolfo Corti, Cinthia Goldman, Mariana Catalano

Open access · greenAbstract read
In one paragraph

Article in Microbial drug resistance (Larchmont, N.Y.), 2017. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 39 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
39citing papers in PubMed, 1 pooled it
5.0field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

39 citing papers in PubMed, 1 synthesis or guideline pooled it, 58 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Biofilm Formation and the Pore ProteinsAntibiotics (Basel, Switzerland) · 2026
    Article
  4. Levofloxacin and Rifampin Resistance inAntibiotics (Basel, Switzerland) · 2026
    Article
  5. Article
  6. Overcoming the effects of increasing antimicrobial resistance onExpert review of gastroenterology & hepatology · 2024
    Review
  7. Article
  8. Genetic Markers ofCurrent issues in molecular biology · 2024
    Article
  9. Article
  10. Article
  11. Development and validation of next-generation sequencing panel for personalizedFrontiers in cellular and infection microbiology · 2024
    Article
  12. Molecular tools of antibiotic resistance forFrontiers in gastroenterology (Lausanne, Switzerland) · 2024
    Review
  13. Article
  14. Biofilm ofAntibiotics (Basel, Switzerland) · 2023
    Review
  15. International journal of molecular sciences · 2023
    Review
  16. Review
  17. Antibiotic Resistance ofJournal of clinical medicine · 2023
    Article
  18. Levofloxacin+Tetracycline Quadruple Regimen for Eradication ofMiddle East journal of digestive diseases · 2023
    Article
  19. Review
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 2 countries.

Gerardo Zerbetto De Palma1 Universidad de Buenos Aires, CONICET, Instituto de Microbiología y Parasitología Médica (IMPAM), Facultad de Medicina, Buenos Aires, Argentina .
Nicolas Mendiondo1 Universidad de Buenos Aires, CONICET, Instituto de Microbiología y Parasitología Médica (IMPAM), Facultad de Medicina, Buenos Aires, Argentina .
Andrés Wonaga2 Centro Integral de Gastroenterología , Buenos Aires, Argentina .
Luis Viola2 Centro Integral de Gastroenterología , Buenos Aires, Argentina .
Daniela Ibarra3 Servicio de Gastroenterología, Hospital Aeronáutico Central , Buenos Aires, Argentina .
Esteban Campitelli3 Servicio de Gastroenterología, Hospital Aeronáutico Central , Buenos Aires, Argentina .
Nicolas Salim4 Servicio de Estómago y Esófago, Hospital de Gastroenterología Bonorino Udaondo , Buenos Aires, Argentina .
Rodolfo Corti4 Servicio de Estómago y Esófago, Hospital de Gastroenterología Bonorino Udaondo , Buenos Aires, Argentina .
Cinthia Goldman5 Universidad de Buenos Aires, Facultad de Farmacia y Bioquímica, Departamento de Fisicomatematica, Cátedra de Física, Buenos Aires, Argentina .
Mariana Catalano1 Universidad de Buenos Aires, CONICET, Instituto de Microbiología y Parasitología Médica (IMPAM), Facultad de Medicina, Buenos Aires, Argentina .
Instituto de Gastroenterología · CUIntegra (United States) · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Domain V of 23S rRNA, gyrA and gyrB Quinolones Resistance-Determining Region (QRDR), and pbp-1A gene point mutations were investigated in Helicobacter pylori-resistant isolates from three centres of Buenos Aires. Minimal inhibitory concentrations (MICs) were performed in 197 isolates from 52 H. pylori-positive naive patients by agar dilution method. Point mutations were achieved by amplification and sequencing of the target genes, and their association with resistance was determined by natural transformation assays. Resistance rates were as follows: metronidazole 28.8%, clarithromycin (CLA) 26.9%, levofloxacin (LEV) 32.7%, and amoxicillin (AMX) 7.6%. Nearly one-third of patients carried multidrug-resistant isolates. A2143G or A2142G in domain V of 23S-rRNA was found in all isolates showing high level of resistance to CLA (MIC >2 mg/L), accounting for 76.0% (38/50) of those with the resistant phenotype. The mutations A2267G or T1861C carried by 8/12 isolates with MIC 1-2 mg/L (low level) did not confer resistance by transformation. Substitutions at GyrA position 87 or 91, mainly N87K and D91G, were found in 92.8% (52/56) of the LEV-resistant isolates: 48 isolates with MIC 4-64 mg/L and 4/8 isolates with MIC 2 mg/L. The remaining four harboured K133N, also present in susceptible isolates. None of the substitutions in GyrB demonstrated to confer resistance. Transformation proved that PBP-1A N562Y and/or T556S substitutions confer the AMX resistance in our isolates, showing an additive effect. In conclusion, the usually reported mutations related to CLA, LEV, and AMX resistance were found in our isolates. However, low-level CLA resistance seems not to be due to mutations in Domain V of 23S rRNA gene.

Indexed as

AmoxicillinAnti-Bacterial AgentsArgentinaClarithromycinDrug Resistance, Multiple, BacterialHelicobacter InfectionsHelicobacter pyloriHumansLevofloxacinMicrobial Sensitivity TestsPoint MutationRNA, Ribosomal, 23SAmoxicillinAnti-Bacterial AgentsClarithromycinLevofloxacinRNA, Ribosomal, 23S23S rRNAgyrAH. pylorimutationspbp-1A

Identifiers

PMID27391421
PMCPMC5397209
OpenAlexW2464958356

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.