Evidence map›Paper›PMID 27391030›Full record

ArticleBMC cancer2016

Involvement of DNMT 3B promotes epithelial-mesenchymal transition and gene expression profile of invasive head and neck squamous cell carcinomas cell lines.

Li-Hsuen Chen, Wen-Lin Hsu, Yen-Ju Tseng, Dai-Wei Liu, Ching-Feng Weng

Erratum issuedOpen access · goldAbstract read
In one paragraph

Article in BMC cancer, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 32 papers.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed
2.8field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 47 citations in OpenAlex.

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  11. DNA Methyltransferases: From Evolution to Clinical Applications.International journal of molecular sciences · 2022
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Li-Hsuen ChenDepartment of Life Science and the Institute of Biotechnology, National Dong Hwa University, Hualien, Taiwan.
Wen-Lin HsuDepartment of Radiation Oncology, Buddhist Tzu Chi General Hospital, Hualien, Taiwan.
Yen-Ju TsengDepartment of Life Science and the Institute of Biotechnology, National Dong Hwa University, Hualien, Taiwan.
Dai-Wei LiuDepartment of Radiation Oncology, Buddhist Tzu Chi General Hospital, Hualien, Taiwan. dwliu5177@yahoo.com.tw.
Ching-Feng WengDepartment of Life Science and the Institute of Biotechnology, National Dong Hwa University, Hualien, Taiwan. cfweng@mail.ndhu.edu.tw.
Buddhist Tzu Chi General Hospital · TWNational Dong Hwa University · TW

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundThe 5-year overall survival rates for head and neck cancer (HNC) relies on distant metastasis. Importantly, the epithelial-mesenchymal transition (EMT) is believed to be an initial step of metastasis. However, the relationship of epigenetic with EMT formation is still unexplored in HNC. This study focuses on invasive subclones of HNC cell lines through the simulation of invasion in vitro; and underlying mechanisms were analyzed including DNA methylation and gene expression profile.

methodsInvasive subclones of NHC cell lines were successfully obtained using transwell coated with Matrixgel. Cells invaded through 8 μm pore several times were subcultured and examined with EMT features including morphology, EMT marker genes expression, and invasive ability. Moreover, compared the profile of genes expression in parental and invasive cells was analyzed using mRNA expression array.

resultsDNA methyltransferase 3B (DNMT 3B) was upregulated in invasive subclones and might control the 5' region of E-cadherin (E-cad) methylation and further inhibited E-cad protein expression. Interference of DNMT 3B by siRNA or miRNA 29b could reduce EMT and cell invasion. Expression array analysis revealed the most possible involved pathways in cell invasion including arginine and proline metabolism, TGF-beta, and focal adhesion.

conclusionsDNMT 3B might control EMT by DNA methylation manner in invasive HNC cell lines. Moreover, miR-29b mimic downregulated DNMT 3B and inhibited EMT and cell invasion indicated the role of therapeutic agent for invasive HNC. Genes identified from array data and new molecules are involved in metastasis of HNC need further validation.

Indexed as

Epithelial-Mesenchymal TransitionAntigens, CDCadherinsCarcinoma, Squamous CellCell Line, TumorCell MovementCell ShapeDNA (Cytosine-5-)-MethyltransferasesDNA MethylationDNA Methyltransferase 3BGene Expression Regulation, NeoplasticHead and Neck NeoplasmsHumansMicroRNAsNeoplasm InvasivenessTranscriptomeAntigens, CDCadherinsCDH1 protein, humanDNA (Cytosine-5-)-MethyltransferasesDNA Methyltransferase 3BMicroRNAsMIRN29a microRNA, humanDNMTEMTHead and neck cancerInvasionmiR-29b

Identifiers

PMID27391030
PMCPMC4938990
OpenAlexW2474757718

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.