Evidence map›Paper›PMID 27391019›Full record

ArticlePloS one2016

Viral RNase3 Co-Localizes and Interacts with the Antiviral Defense Protein SGS3 in Plant Cells.

Isabel Weinheimer, Tuuli Haikonen, Marjo Ala-Poikela, Mirko Moser, Janne Streng, Minna-Liisa Rajamäki, Jari P T Valkonen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 20 citations in OpenAlex.

  1. Article
  2. Identification of an RNA silencing suppressor encoded by an Indian citrus ringspot virus.Physiology and molecular biology of plants : an international journal of functional plant biology · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. Frontiers in microbiology · 2023
    Article
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  9. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Isabel WeinheimerDepartment of Agricultural Sciences, University of Helsinki, Helsinki, Finland.
Tuuli HaikonenDepartment of Agricultural Sciences, University of Helsinki, Helsinki, Finland.
Marjo Ala-PoikelaDepartment of Agricultural Sciences, University of Helsinki, Helsinki, Finland.
Mirko MoserFoundation Edmund Mach, San Michele, Italy.
Janne StrengDepartment of Agricultural Sciences, University of Helsinki, Helsinki, Finland.
Minna-Liisa RajamäkiDepartment of Agricultural Sciences, University of Helsinki, Helsinki, Finland.
Jari P T ValkonenDepartment of Agricultural Sciences, University of Helsinki, Helsinki, Finland.
University of Helsinki · FIFondazione Edmund Mach · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Sweet potato chlorotic stunt virus (SPCSV; family Closteroviridae) encodes a Class 1 RNase III endoribonuclease (RNase3) that suppresses post-transcriptional RNA interference (RNAi) and eliminates antiviral defense in sweetpotato plants (Ipomoea batatas). For RNAi suppression, RNase3 cleaves double-stranded small interfering RNAs (ds-siRNA) and long dsRNA to fragments that are too short to be utilized in RNAi. However, RNase3 can suppress only RNAi induced by sense RNA. Sense-mediated RNAi involves host suppressor of gene silencing 3 (SGS3) and RNA-dependent RNA polymerase 6 (RDR6). In this study, subcellular localization and host interactions of RNase3 were studied in plant cells. RNase3 was found to interact with SGS3 of sweetpotato and Arabidopsis thaliana when expressed in leaves, and it localized to SGS3/RDR6 bodies in the cytoplasm of leaf cells and protoplasts. RNase3 was also detected in the nucleus. Co-expression of RNase3 and SGS3 in leaf tissue enhanced the suppression of RNAi, as compared with expression of RNase3 alone. These results suggest additional mechanisms needed for efficient RNase3-mediated suppression of RNAi and provide new information about the subcellular context and phase of the RNAi pathway in which RNase3 realizes RNAi suppression.

Indexed as

ClosteroviridaeCytoplasmEosinophil Cationic ProteinPlant CellsPlant DiseasesPlant LeavesPlant ProteinsRNA InterferenceRNA, Small InterferingEosinophil Cationic ProteinPlant ProteinsRNA, Small Interfering

Identifiers

PMID27391019
PMCPMC4938523
OpenAlexW2475022965

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.