Evidence map›Paper›PMID 27389685›Full record

ReviewGenome biology and evolution2016

Pitfalls of the Geographic Population Structure (GPS) Approach Applied to Human Genetic History: A Case Study of Ashkenazi Jews.

Pavel Flegontov, Alexei Kassian, Mark G Thomas, Valentina Fedchenko, Piya Changmai, George Starostin

Erratum issuedOpen access · goldAbstract readReview
In one paragraph

Review in Genome biology and evolution, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
1.8field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 6 institutions in 3 countries.

Pavel FlegontovDepartment of Biology and Ecology, Faculty of Science, University of Ostrava, Czech Republic Institute of Parasitology, Biology Centre, Czech Academy of Sciences, Ceske Budejovice, Czech Republic A.A. Kharkevich Institute for Information Transmission Problems, Russian Academy of Sciences, Moscow, Russia pavel.flegontov@osu.cz,a.kassian@gmail.com.
Alexei KassianInstitute of Linguistics, Russian Academy of Sciences, Moscow, Russia Russian Presidential Academy of National Economy and Public Administration (RANEPA), Moscow, Russia pavel.flegontov@osu.cz,a.kassian@gmail.com.
Mark G ThomasResearch Department of Genetics, Evolution and Environment, University College London, United Kingdom.
Valentina FedchenkoSaint Petersburg State University, Russia.
Piya ChangmaiDepartment of Biology and Ecology, Faculty of Science, University of Ostrava, Czech Republic.
George StarostinRussian Presidential Academy of National Economy and Public Administration (RANEPA), Moscow, Russia Russian State University for the Humanities, Moscow, Russia.
Institute for Information Transmission Problems · RUInstitute of Linguistics · RUSt Petersburg University · RUThe Russian Presidential Academy of National Economy and Public Administration · RUUniversity College London · GBUniversity of Ostrava · CZ

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

In a recent interdisciplinary study, Das et al. have attempted to trace the homeland of Ashkenazi Jews and of their historical language, Yiddish (Das et al. 2016 Localizing Ashkenazic Jews to Primeval Villages in the Ancient Iranian Lands of Ashkenaz. Genome Biol Evol. 8:1132-1149). Das et al. applied the geographic population structure (GPS) method to autosomal genotyping data and inferred geographic coordinates of populations supposedly ancestral to Ashkenazi Jews, placing them in Eastern Turkey. They argued that this unexpected genetic result goes against the widely accepted notion of Ashkenazi origin in the Levant, and speculated that Yiddish was originally a Slavic language strongly influenced by Iranian and Turkic languages, and later remodeled completely under Germanic influence. In our view, there are major conceptual problems with both the genetic and linguistic parts of the work. We argue that GPS is a provenancing tool suited to inferring the geographic region where a modern and recently unadmixed genome is most likely to arise, but is hardly suitable for admixed populations and for tracing ancestry up to 1,000 years before present, as its authors have previously claimed. Moreover, all methods of historical linguistics concur that Yiddish is a Germanic language, with no reliable evidence for Slavic, Iranian, or Turkic substrata.

Indexed as

Evolution, MolecularHuman MigrationGenetics, PopulationGenome, HumanHumansJewsPedigreePopulationAshkenazi Jewsgeographic population structurepopulation geneticsrelexification.Yiddish

Identifiers

PMID27389685
PMCPMC4987117
OpenAlexW2475045057

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.