Evidence map›Paper›PMID 27388209›Full record

ArticleVirology journal2016

The complete genome of the tospovirus Zucchini lethal chlorosis virus.

R N Lima, A S De Oliveira, M O Leastro, R Blawid, T Nagata, R O Resende, F L Melo

Open access · goldAbstract read
In one paragraph

Article in Virology journal, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
4.8field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 10 citations in OpenAlex.

  1. Review
  2. TheFrontiers in plant science · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

R N LimaLaboratory of Virology, Department of Cell Biology, University of Brasilia, Brasilia, DF, 70910-900, Brazil.
A S De OliveiraLaboratory of Virology, Department of Cell Biology, University of Brasilia, Brasilia, DF, 70910-900, Brazil.
M O LeastroLaboratory of Virology, Department of Cell Biology, University of Brasilia, Brasilia, DF, 70910-900, Brazil.
R BlawidLaboratory of Virology, Department of Cell Biology, University of Brasilia, Brasilia, DF, 70910-900, Brazil.
T NagataLaboratory of Virology, Department of Cell Biology, University of Brasilia, Brasilia, DF, 70910-900, Brazil.
R O ResendeLaboratory of Virology, Department of Cell Biology, University of Brasilia, Brasilia, DF, 70910-900, Brazil.
F L MeloLaboratory of Virology, Department of Cell Biology, University of Brasilia, Brasilia, DF, 70910-900, Brazil. flmelo@unb.br.
Universidade de Brasília · BR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundZucchini lethal chlorosis virus (ZLCV) causes significant losses in the production of cucurbits in Brazil. This virus belongs to the genus Tospovirus (family Bunyaviridae) and seems to be exclusively transmitted by Frankliniella zucchini (Thysanoptera). Tospoviruses have a tripartite and single-stranded RNA genome classified as S (Small), M (Medium) and L (Large) RNAS. Although ZLCV was identified as a member of the genus Tospovirus in 1999, its complete genome had not been sequenced until now.

findingsWe sequenced the full-length genome of two ZLCV isolates named ZLCV-SP and ZLCV-DF. The phylogenetic analysis showed that ZLCV-SP and ZLCV-DF clustered with the previously reported isolate ZLCV-BR09. Their proteins were closely related, except the non-structural protein (NSm), which was highly divergent (approximately 90 % identity). All viral proteins clustered similarly in our phylogenetic analysis, excluding that these ZLCV isolates have originated from reassortment events of different tospovirus species.

conclusionHere we report for the first time the complete genome of two ZLCV isolates that were found in the field infecting zucchini and cucumber.

Indexed as

Genome, ViralAmino Acid SequenceBase SequenceCucurbitaMolecular Sequence DataPhylogenyPlant DiseasesSequence AlignmentTospovirusViral ProteinsViral ProteinsGenomeIlluminaTospovirusZLCVZucchini

Identifiers

PMID27388209
PMCPMC4936248
OpenAlexW2471336134

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.