ArticleSpringerPlus2016
Genome-wide identification of soybean WRKY transcription factors in response to salt stress.
Article in SpringerPlus, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 52 papers.
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Who cites it
52 citing papers in PubMed.
- Article
- Hyperspectral phenotyping and GWAS identify novel QTLs for soybean photosynthetic rate.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2026Article
- Article
- Identification of Genomic Regions for Partial Resistance to Soybean Rust Under Field Conditions Using FarmCPU and Machine Learning Approaches.Plants (Basel, Switzerland) · 2026Article
- Genome-Wide Comparative Analysis of WRKY Gene Family Explores Insight Into the Evolution and Expression Divergence in the GenusFood science & nutrition · 2025Article
- Soybean GmWRKY44 transcription factor activates SOC1 and LFY to promote flowering in Arabidopsis thaliana.Plant cell reports · 2025Article
- Genome-wide identification and expression profiling of WRKY gene family in grain Amaranth (Amaranthus hypochondriacus L.) under salinity and drought stresses.BMC plant biology · 2025Article
- Omics-Driven Strategies for Developing Saline-Smart Lentils: A Comprehensive Review.International journal of molecular sciences · 2024Review
- Genome-wide identification, expression analysis of WRKY transcription factors in Citrus ichangensis and functional validation of CiWRKY31 in response to cold stress.BMC plant biology · 2024Article
- A comprehensive analysis of the WRKY family in soybean and functional analysis of GmWRKY164-GmGSL7c in resistance to soybean mosaic virus.BMC genomics · 2024Article
- Full-Length Transcriptome Sequencing Analysis and Characterization of WRKY Transcription Factors Responsive to Cadmium Stress inPlants (Basel, Switzerland) · 2023Article
- RNA-seq profiling in leaf tissues of two soybean (Molecular breeding : new strategies in plant improvement · 2023Article
- Identifications of QTLs and Candidate Genes Associated withInternational journal of molecular sciences · 2023Article
- Plant salinity stress, sensing, and its mitigation through WRKY.Frontiers in plant science · 2023Review
- Regulation of the regulators: Transcription factors controlling biosynthesis of plant secondary metabolites during biotic stresses and their regulation by miRNAs.Frontiers in plant science · 2023Review
- Comparative transcriptome responses of leaf and root tissues to salt stress in wheat strains with different salinity tolerances.Frontiers in genetics · 2023Article
- Genome-wide identification and bioinformatics analysis of the WRKY transcription factors and screening of candidate genes for anthocyanin biosynthesis in azalea (Frontiers in genetics · 2023Article
- Multifaceted roles of WRKY transcription factors in abiotic stress and flavonoid biosynthesis.Frontiers in plant science · 2023Review
- Genome-wide analysis of the WRKY genes and their important roles during cold stress in white clover.PeerJ · 2023Article
- Molecular Tools and Their Applications in Developing Salt-Tolerant Soybean (Bioengineering (Basel, Switzerland) · 2022Review
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Authors and funding
4 authors.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Members of the large family of WRKY transcription factors are involved in a wide range of developmental and physiological processes, most particularly in the plant response to biotic and abiotic stress. Here, an analysis of the soybean genome sequence allowed the identification of the full complement of 188 soybean WRKY genes. Phylogenetic analysis revealed that soybean WRKY genes were classified into three major groups (I, II, III), with the second group further categorized into five subgroups (IIa-IIe). The soybean WRKYs from each group shared similar gene structures and motif compositions. The location of the GmWRKYs was dispersed over all 20 soybean chromosomes. The whole genome duplication appeared to have contributed significantly to the expansion of the family. Expression analysis by RNA-seq indicated that in soybean root, 66 of the genes responded rapidly and transiently to the imposition of salt stress, all but one being up-regulated. While in aerial part, 49 GmWRKYs responded, all but two being down-regulated. RT-qPCR analysis showed that in the whole soybean plant, 66 GmWRKYs exhibited distinct expression patterns in response to salt stress, of which 12 showed no significant change, 35 were decreased, while 19 were induced. The data present here provide critical clues for further functional studies of WRKY gene in soybean salt tolerance.
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