Evidence map›Paper›PMID 27385827›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Source-sink plasmid transfer dynamics maintain gene mobility in soil bacterial communities.

James P J Hall, A Jamie Wood, Ellie Harrison, Michael A Brockhurst

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 109 papers.

0numbers the graph read from it
0cells of the map it votes in
109citing papers in PubMed
5.3field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

109 citing papers in PubMed, 200 citations in OpenAlex.

  1. Article
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  14. Jumbo phage-mediated transduction of genomic islands.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  15. Article
  16. Article
  17. Seaweed exposure modulatesMicrobiology (Reading, England) · 2025
    Article
  18. Plasmid genomic epidemiology ofMicrobial genomics · 2025
    Article
  19. The extended mobility of plasmids.Nucleic acids research · 2025
    Review
  20. Article

49 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 1 institution in 1 country.

James P J HallDepartment of Biology, University of York, York YO10 5DD, United Kingdom; james.hall@york.ac.uk.ORCID 0000-0002-4896-4592
A Jamie WoodDepartment of Biology, University of York, York YO10 5DD, United Kingdom; Department of Mathematics, University of York, York YO10 5DD, United Kingdom.
Ellie HarrisonDepartment of Biology, University of York, York YO10 5DD, United Kingdom;ORCID 0000-0002-2050-4631
Michael A BrockhurstDepartment of Biology, University of York, York YO10 5DD, United Kingdom;ORCID 0000-0003-0362-820X
University of York · GB

Funding

European Research Council 311490
6 · The paper itself

Abstract

Horizontal gene transfer is a fundamental process in bacterial evolution that can accelerate adaptation via the sharing of genes between lineages. Conjugative plasmids are the principal genetic elements mediating the horizontal transfer of genes, both within and between bacterial species. In some species, plasmids are unstable and likely to be lost through purifying selection, but when alternative hosts are available, interspecific plasmid transfer could counteract this and maintain access to plasmid-borne genes. To investigate the evolutionary importance of alternative hosts to plasmid population dynamics in an ecologically relevant environment, we established simple soil microcosm communities comprising two species of common soil bacteria, Pseudomonas fluorescens and Pseudomonas putida, and a mercury resistance (Hg(R)) plasmid, pQBR57, both with and without positive selection [i.e., addition of Hg(II)]. In single-species populations, plasmid stability varied between species: although pQBR57 survived both with and without positive selection in P. fluorescens, it was lost or replaced by nontransferable Hg(R) captured to the chromosome in P. putida A simple mathematical model suggests these differences were likely due to pQBR57's lower intraspecific conjugation rate in P. putida By contrast, in two-species communities, both models and experiments show that interspecific conjugation from P. fluorescens allowed pQBR57 to persist in P. putida via source-sink transfer dynamics. Moreover, the replacement of pQBR57 by nontransferable chromosomal Hg(R) in P. putida was slowed in coculture. Interspecific transfer allows plasmid survival in host species unable to sustain the plasmid in monoculture, promoting community-wide access to the plasmid-borne accessory gene pool and thus potentiating future evolvability.

Indexed as

Soil MicrobiologyAnti-Bacterial AgentsMercuryPlasmidsPseudomonas fluorescensPseudomonas putidaAnti-Bacterial AgentsMercuryhorizontal gene transfermicrobial ecologymobile genetic elementsplasmids

Identifiers

PMID27385827
PMCPMC4961173
OpenAlexW2468704695

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.