Evidence map›Paper›PMID 27385826›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Numerous proteins with unique characteristics are degraded by the 26S proteasome following monoubiquitination.

Ori Braten, Ido Livneh, Tamar Ziv, Arie Admon, Izhak Kehat, Lilac H Caspi, Hedva Gonen, Beatrice Bercovich, Adam Godzik, Samad Jahandideh and 6 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 96 papers.

0numbers the graph read from it
0cells of the map it votes in
96citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

96 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Deubiquitinase OTULIN dampens RIG-I-dependent antiviral signaling by removing linear ubiquitination from TRAF6.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  5. Article
  6. Review
  7. Review
  8. Article
  9. AKT and DUBs: a bidirectional relationship.Cellular & molecular biology letters · 2025
    Review
  10. Antitumor effect of BC12-3 on multiple myeloma via proteasome inhibition.Medical oncology (Northwood, London, England) · 2025
    Article
  11. CXXC5 is a ubiquitinated protein and is degraded by the ubiquitin-proteasome pathway.Protein science : a publication of the Protein Society · 2025
    Article
  12. Tau degradation in Alzheimer's disease: Mechanisms and therapeutic opportunities.Alzheimer's & dementia : the journal of the Alzheimer's Association · 2025
    Review
  13. Review
  14. Article
  15. Proteolysis in plant immunity.The Plant cell · 2024
    Review
  16. Article
  17. Article
  18. Review
  19. Ubiquitination and Metabolic Disease.Advances in experimental medicine and biology · 2024
    Review
  20. Hypertrophic cardiomyopathy inThe journal of cardiovascular aging · 2024
    Article

36 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

16 authors.

Ori BratenTechnion Integrated Cancer Center, The Rappaport Faculty of Medicine and Research Institute, Technion-Israel Institute of Technology, Haifa, 3109602, Israel;
Ido LivnehTechnion Integrated Cancer Center, The Rappaport Faculty of Medicine and Research Institute, Technion-Israel Institute of Technology, Haifa, 3109602, Israel;
Tamar ZivSmoler Proteomic Center, Technion-Israel Institute of Technology, Haifa, 3200003, Israel; Faculty of Biology, Technion-Israel Institute of Technology, Haifa, 3200003, Israel;
Arie AdmonSmoler Proteomic Center, Technion-Israel Institute of Technology, Haifa, 3200003, Israel; Faculty of Biology, Technion-Israel Institute of Technology, Haifa, 3200003, Israel;
Izhak KehatDepartment of Physiology, The Rappaport Faculty of Medicine and Research Institute, Technion-Israel Institute of Technology, Haifa, 3109602, Israel;
Lilac H CaspiDepartment of Physiology, The Rappaport Faculty of Medicine and Research Institute, Technion-Israel Institute of Technology, Haifa, 3109602, Israel;
Hedva GonenTechnion Integrated Cancer Center, The Rappaport Faculty of Medicine and Research Institute, Technion-Israel Institute of Technology, Haifa, 3109602, Israel;
Beatrice BercovichTechnion Integrated Cancer Center, The Rappaport Faculty of Medicine and Research Institute, Technion-Israel Institute of Technology, Haifa, 3109602, Israel;
Adam GodzikBioinformatics and Systems Biology Program, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA 92037;
Samad JahandidehBioinformatics and Systems Biology Program, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA 92037;
Lukasz JaroszewskiBioinformatics and Systems Biology Program, Sanford Burnham Prebys Medical Discovery Institute, La Jolla, CA 92037;
Thomas SommerMax Delbrück Center for Molecular Medicine, 13125 Berlin, Germany;
Yong Tae KwonProtein Metabolism Medical Research Center, College of Medicine, Seoul National University, Seoul 110-799, South Korea; Department of Biomedical Sciences, College of Medicine, Seoul National University, Seoul 110-799, South Korea;
Mainak GuharoyVlaams Instituut voor Biotechnologie Structural Biology Research Center, Vrije Universiteit Brussel, 1050 Brussels, Belgium;
Peter TompaVlaams Instituut voor Biotechnologie Structural Biology Research Center, Vrije Universiteit Brussel, 1050 Brussels, Belgium; Structural Biology Brussels, Vrije Universiteit Brussel, 1050 Brussels, Belgium; Institute of Enzymology, Research Center for Natural Sciences of the Hungarian Academy of Sciences, 1117 Budapest, Hungary.
Aaron CiechanoverTechnion Integrated Cancer Center, The Rappaport Faculty of Medicine and Research Institute, Technion-Israel Institute of Technology, Haifa, 3109602, Israel; Protein Metabolism Medical Research Center, College of Medicine, Seoul National University, Seoul 110-799, South Korea; Department of Biomedical Sciences, College of Medicine, Seoul National University, Seoul 110-799, South Korea; aaroncie@technion.ac.il.

Funding

Development of the flexible comparative modeling toolkitR01GM101457 · NIGMS · SANFORD BURNHAM PREBYS MEDICAL DISCOVERY INSTITUTE · PI GODZIK, ADAM · 2012 to 2015
$1.5M
NIGMS NIH HHS R01 GM101457
6 · The paper itself

Abstract

The "canonical" proteasomal degradation signal is a substrate-anchored polyubiquitin chain. However, a handful of proteins were shown to be targeted following monoubiquitination. In this study, we established-in both human and yeast cells-a systematic approach for the identification of monoubiquitination-dependent proteasomal substrates. The cellular wild-type polymerizable ubiquitin was replaced with ubiquitin that cannot form chains. Using proteomic analysis, we screened for substrates that are nevertheless degraded under these conditions compared with those that are stabilized, and therefore require polyubiquitination for their degradation. For randomly sampled representative substrates, we confirmed that their cellular stability is in agreement with our screening prediction. Importantly, the two groups display unique features: monoubiquitinated substrates are smaller than the polyubiquitinated ones, are enriched in specific pathways, and, in humans, are structurally less disordered. We suggest that monoubiquitination-dependent degradation is more widespread than assumed previously, and plays key roles in various cellular processes.

Indexed as

UbiquitinationHumansMCF-7 CellsProteasome Endopeptidase ComplexProteinsProteomicsATP dependent 26S proteaseProteasome Endopeptidase ComplexProteins26S proteasomemonoubiquitinationprotein degradationubiquitin replacement

Identifiers

PMID27385826
PMCPMC4987823

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.