Evidence map›Paper›PMID 27385817›Full record

ArticleThe Plant cell2016

Local Auxin Biosynthesis Mediated by a YUCCA Flavin Monooxygenase Regulates Haustorium Development in the Parasitic Plant Phtheirospermum japonicum.

Juliane K Ishida, Takanori Wakatake, Satoko Yoshida, Yumiko Takebayashi, Hiroyuki Kasahara, Eric Wafula, Claude W dePamphilis, Shigetou Namba, Ken Shirasu

Open access · greenAbstract read
In one paragraph

Article in The Plant cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
20.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 140 citations in OpenAlex.

  1. Review
  2. Review
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. IAA-Mediated Haustorium Formation inPlants (Basel, Switzerland) · 2025
    Article
  11. Article
  12. Effects of Exogenous Phenolic Acids on Haustorium Induction ofInternational journal of molecular sciences · 2025
    Article
  13. Systemic signals control infection plasticity in parasitic plants.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  14. A long-distance inhibitory system regulates haustoria numbers in parasitic plants.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  15. Article
  16. The peptide hormoneProceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  17. Parasitic Plants-Potential Vectors of Phytopathogens.Pathogens (Basel, Switzerland) · 2024
    Review
  18. Exploring Information Exchange betweenPlants (Basel, Switzerland) · 2024
    Article
  19. Article
  20. Article

13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Juliane K IshidaRIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan Graduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo, Tokyo 113-8657, Japan.ORCID 0000-0002-0956-7578
Takanori WakatakeRIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan Graduate School of Science, The University of Tokyo, Bunkyo, Tokyo 113-0033, Japan.ORCID 0000-0002-9991-9054
Satoko YoshidaRIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan Institute for Research Initiatives, Division for Research Strategy, Nara Institute of Science and Technology, Ikoma, Nara 630-0192, Japan.ORCID 0000-0002-9999-7861
Yumiko TakebayashiRIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan.
Hiroyuki KasaharaRIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan Institute of Global Innovation Research, Tokyo University of Agriculture and Technology, Fuchu-shi, Tokyo 183-8509, Japan.
Eric WafulaDepartment of Biology, Pennsylvania State University, University Park, Pennsylvania 16802.
Claude W dePamphilisDepartment of Biology, Pennsylvania State University, University Park, Pennsylvania 16802.
Shigetou NambaGraduate School of Agricultural and Life Sciences, The University of Tokyo, Bunkyo, Tokyo 113-8657, Japan.
Ken ShirasuRIKEN Center for Sustainable Resource Science, Yokohama 230-0045, Japan Graduate School of Science, The University of Tokyo, Bunkyo, Tokyo 113-0033, Japan ken.shirasu@riken.jp.ORCID 0000-0002-0349-3870
RIKEN Center for Sustainable Resource Science · JPPennsylvania State University · USThe University of Tokyo · JP

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Parasitic plants in the Orobanchaceae cause serious agricultural problems worldwide. Parasitic plants develop a multicellular infectious organ called a haustorium after recognition of host-released signals. To understand the molecular events associated with host signal perception and haustorium development, we identified differentially regulated genes expressed during early haustorium development in the facultative parasite Phtheirospermum japonicum using a de novo assembled transcriptome and a customized microarray. Among the genes that were upregulated during early haustorium development, we identified YUC3, which encodes a functional YUCCA (YUC) flavin monooxygenase involved in auxin biosynthesis. YUC3 was specifically expressed in the epidermal cells around the host contact site at an early time point in haustorium formation. The spatio-temporal expression patterns of YUC3 coincided with those of the auxin response marker DR5, suggesting generation of auxin response maxima at the haustorium apex. Roots transformed with YUC3 knockdown constructs formed haustoria less frequently than nontransgenic roots. Moreover, ectopic expression of YUC3 at the root epidermal cells induced the formation of haustorium-like structures in transgenic P. japonicum roots. Our results suggest that expression of the auxin biosynthesis gene YUC3 at the epidermal cells near the contact site plays a pivotal role in haustorium formation in the root parasitic plant P. japonicum.

Indexed as

Gene Expression Regulation, PlantIndoleacetic AcidsMixed Function OxygenasesPlant RootsPlants, Genetically ModifiedYuccaIndoleacetic AcidsMixed Function Oxygenases

Identifiers

PMID27385817
PMCPMC5006708
OpenAlexW2466204428

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.