Evidence map›Paper›PMID 27384559›Full record

ArticleInternational journal of molecular sciences2016

Digital Gene Expression Analysis of Ponkan Mandarin (Citrus reticulata Blanco) in Response to Asia Citrus Psyllid-Vectored Huanglongbing Infection.

Yun Zhong, Chunzhen Cheng, Bo Jiang, Nonghui Jiang, Yongyan Zhang, Minlun Hu, Guangyan Zhong

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

  1. Article
  2. Expression characteristics ofPlant signaling & behavior · 2025
    Article
  3. Article
  4. Article
  5. Article
  6. A comprehensive review onFrontiers in genetics · 2024
    Review
  7. Article
  8. MicroRNA miR171b Positively Regulates Resistance to Huanglongbing of Citrus.International journal of molecular sciences · 2023
    Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Yun ZhongInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China. zhongyun99cn@163.com.
Chunzhen ChengInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China. ld0532cheng@126.com.
Bo JiangInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China. jb-clinnic@webmail.hzau.edu.cn.
Nonghui JiangInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China. jiangnonghui2002@163.com.
Yongyan ZhangInstitute of Horticultural Biotechnology, Fujian Agriculture and Forestry University, Fuzhou 350002, China. zhyy0425@126.com.
Minlun HuInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China. fanshu2005@163.com.
Guangyan ZhongInstitute of Fruit Tree Research, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China. gy_zhong@163.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Citrus Huanglongbing (HLB), the most destructive citrus disease, can be transmitted by psyllids and diseased budwoods. Although the final symptoms of the two main HLB transmission ways were similar and hard to distinguish, the host responses might be different. In this study, the global gene changes in leaves of ponkan (Citrus reticulata) mandarin trees following psyllid-transmission of HLB were analyzed at the early symptomatic stage (13 weeks post inoculation, wpi) and late symptomatic stage (26 wpi) using digital gene expression (DGE) profiling. At 13 wpi, 2452 genes were downregulated while only 604 genes were upregulated in HLB infected ponkan leaves but no pathway enrichment was identified. Gene function analysis showed impairment in defense at the early stage of infection. At late stage of 26 wpi, however, differentially expressed genes (DEGs) involved in carbohydrate metabolism, plant defense, hormone signaling, secondary metabolism, transcription regulation were overwhelmingly upregulated, indicating that the defense reactions were eventually activated. The results indicated that HLB bacterial infection significantly influenced ponkan gene expression, and a delayed response of the host to the fast growing bacteria might be responsible for its failure in fighting against the bacteria.

Indexed as

AlphaproteobacteriaGene Expression Regulation, PlantAnimalsCitrusHemipteraPlant DiseasesPlant LeavesAsian citrus psyllids (ACP)Citrus Huanglongbing (HLB)differentially expressed genes (DEGs)digital gene expression (DGE)ponkan mandarin

Identifiers

PMID27384559
PMCPMC4964439

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.