Evidence map›Paper›PMID 27383841›Full record

ArticlePloS one2016

Predicting Hybrid Performances for Quality Traits through Genomic-Assisted Approaches in Central European Wheat.

Guozheng Liu, Yusheng Zhao, Manje Gowda, C Friedrich H Longin, Jochen C Reif, Michael F Mette

Abstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Optimum breeding strategies using genomic and phenotypic selection for the simultaneous improvement of two traits.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2021
    Article
  6. Review
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. The potential of hybrid breeding to enhance leaf rust and stripe rust resistance in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2020
    Article
  13. Article
  14. Article
  15. Article
  16. Hybrid wheat: past, present and future.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Review
  17. The effects of training population design on genomic prediction accuracy in wheat.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Article
  18. Reciprocal recurrent genomic selection: an attractive tool to leverage hybrid wheat breeding.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2019
    Review
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Guozheng LiuDepartment of Breeding Research, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Stadt Seeland, Germany.
Yusheng ZhaoDepartment of Breeding Research, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Stadt Seeland, Germany.
Manje GowdaState Plant Breeding Institute, University of Hohenheim, Stuttgart, Germany.
C Friedrich H LonginState Plant Breeding Institute, University of Hohenheim, Stuttgart, Germany.
Jochen C ReifDepartment of Breeding Research, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Stadt Seeland, Germany.
Michael F MetteDepartment of Breeding Research, Leibniz Institute of Plant Genetics and Crop Plant Research (IPK), Stadt Seeland, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bread-making quality traits are central targets for wheat breeding. The objectives of our study were to (1) examine the presence of major effect QTLs for quality traits in a Central European elite wheat population, (2) explore the optimal strategy for predicting the hybrid performance for wheat quality traits, and (3) investigate the effects of marker density and the composition and size of the training population on the accuracy of prediction of hybrid performance. In total 135 inbred lines of Central European bread wheat (Triticum aestivum L.) and 1,604 hybrids derived from them were evaluated for seven quality traits in up to six environments. The 135 parental lines were genotyped using a 90k single-nucleotide polymorphism array. Genome-wide association mapping initially suggested presence of several quantitative trait loci (QTLs), but cross-validation rather indicated the absence of major effect QTLs for all quality traits except of 1000-kernel weight. Genomic selection substantially outperformed marker-assisted selection in predicting hybrid performance. A resampling study revealed that increasing the effective population size in the estimation set of hybrids is relevant to boost the accuracy of prediction for an unrelated test population.

Indexed as

Hybridization, GeneticBreadChromosome MappingChromosomes, PlantEuropeGenes, PlantGenome, PlantGenomicsGenotypeHybrid VigorPhenotypePlant BreedingPolymorphism, Single NucleotideQuantitative Trait LociSpecies SpecificityTriticum

Identifiers

PMID27383841
PMCPMC4934823

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.