Evidence map›Paper›PMID 27383630›Full record

ArticleOpen biology2016

Combined structural, biochemical and cellular evidence demonstrates that both FGDF motifs in alphavirus nsP3 are required for efficient replication.

Tim Schulte, Lifeng Liu, Marc D Panas, Bastian Thaa, Nicole Dickson, Benjamin Götte, Adnane Achour, Gerald M McInerney

Abstract read
In one paragraph

Article in Open biology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 53 papers.

0numbers the graph read from it
0cells of the map it votes in
53citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

53 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
  4. Pharmacological modulation of stress granulesFrontiers in pharmacology · 2026
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Article
  16. Stress granule formation helps to mitigate neurodegeneration.bioRxiv : the preprint server for biology · 2023
    Article
  17. Role(s) of G3BPs in Human Pathogenesis.The Journal of pharmacology and experimental therapeutics · 2023
    Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Tim SchulteScience for Life Laboratory, Department of Medicine Solna, Karolinska Institutet, Stockholm, Sweden Department of Infectious Diseases, Karolinska University Hospital, Solna, Stockholm, Sweden.
Lifeng LiuDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden.
Marc D PanasDivision of Rheumatology, Immunology and Allergy, Harvard Medical School and Brigham and Women's Hospital, Smith 652; 1 Jimmy Fund Way, Boston, MA 02115, USA.
Bastian ThaaDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden.
Nicole DicksonScience for Life Laboratory, Department of Medicine Solna, Karolinska Institutet, Stockholm, Sweden Department of Infectious Diseases, Karolinska University Hospital, Solna, Stockholm, Sweden.
Benjamin GötteDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden.
Adnane AchourScience for Life Laboratory, Department of Medicine Solna, Karolinska Institutet, Stockholm, Sweden Department of Infectious Diseases, Karolinska University Hospital, Solna, Stockholm, Sweden adnane.achour@ki.se.
Gerald M McInerneyDepartment of Microbiology, Tumor and Cell Biology, Karolinska Institutet, Stockholm, Sweden gerald.mcinerney@ki.se.ORCID 0000-0003-2257-7241

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent findings have highlighted the role of the Old World alphavirus non-structural protein 3 (nsP3) as a host defence modulator that functions by disrupting stress granules, subcellular phase-dense RNA/protein structures formed upon environmental stress. This disruption mechanism was largely explained through nsP3-mediated recruitment of the host G3BP protein via two tandem FGDF motifs. Here, we present the 1.9 Å resolution crystal structure of the NTF2-like domain of G3BP-1 in complex with a 25-residue peptide derived from Semliki Forest virus nsP3 (nsP3-25). The structure reveals a poly-complex of G3BP-1 dimers interconnected through the FGDF motifs in nsP3-25. Although in vitro and in vivo binding studies revealed a hierarchical interaction of the two FGDF motifs with G3BP-1, viral growth curves clearly demonstrated that two intact FGDF motifs are required for efficient viral replication. Chikungunya virus nsP3 also binds G3BP dimers via a hierarchical interaction, which was found to be critical for viral replication. These results highlight a conserved molecular mechanism in host cell modulation.

Indexed as

Amino Acid MotifsCell LineChikungunya virusConserved SequenceCrystallography, X-RayDNA HelicasesHEK293 CellsHumansModels, MolecularPoly-ADP-Ribose Binding ProteinsProtein BindingProtein MultimerizationProtein Structure, TertiaryRNA-Binding ProteinsRNA HelicasesRNA Recognition Motif ProteinsDNA HelicasesG3BP1 protein, humanNsp3 protein, semliki forest virusPoly-ADP-Ribose Binding ProteinsRNA-Binding ProteinsRNA HelicasesRNA Recognition Motif ProteinsViral Nonstructural Proteinsinnate immunityprotein structure–functionstress responsevirus–host interaction

Identifiers

PMID27383630
PMCPMC4967826

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.