Evidence map›Paper›PMID 27382182›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

In situ characterization of the mTORC1 during adipogenesis of human adult stem cells on chip.

Xuanye Wu, Nils Schneider, Alina Platen, Indranil Mitra, Matthias Blazek, Roland Zengerle, Roland Schüle, Matthias Meier

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Review
  12. Article
  13. Article
  14. Review
  15. Multiplexed Point-of-Care Testing - xPOCT.Trends in biotechnology · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Xuanye WuMicrofluidic and Biological Engineering, Department of Microsystems Engineering (IMTEK), University of Freiburg, 79110 Freiburg, Germany; Centre for Biological Signalling Studies (BIOSS), University of Freiburg, 79104 Freiburg, Germany;
Nils SchneiderMicrofluidic and Biological Engineering, Department of Microsystems Engineering (IMTEK), University of Freiburg, 79110 Freiburg, Germany; Centre for Biological Signalling Studies (BIOSS), University of Freiburg, 79104 Freiburg, Germany;
Alina PlatenMicrofluidic and Biological Engineering, Department of Microsystems Engineering (IMTEK), University of Freiburg, 79110 Freiburg, Germany; Centre for Biological Signalling Studies (BIOSS), University of Freiburg, 79104 Freiburg, Germany;
Indranil MitraMicrofluidic and Biological Engineering, Department of Microsystems Engineering (IMTEK), University of Freiburg, 79110 Freiburg, Germany; Centre for Biological Signalling Studies (BIOSS), University of Freiburg, 79104 Freiburg, Germany;
Matthias BlazekMicrofluidic and Biological Engineering, Department of Microsystems Engineering (IMTEK), University of Freiburg, 79110 Freiburg, Germany; Centre for Biological Signalling Studies (BIOSS), University of Freiburg, 79104 Freiburg, Germany;
Roland ZengerleCentre for Biological Signalling Studies (BIOSS), University of Freiburg, 79104 Freiburg, Germany; Laboratory for MEMS Applications, Department of Microsystems Engineering (IMTEK), University of Freiburg, 79110 Freiburg, Germany;
Roland SchüleCentre for Biological Signalling Studies (BIOSS), University of Freiburg, 79104 Freiburg, Germany; Urologische Klinik und Zentrale Klinische Forschung, Klinikum der Universität Freiburg, 79106 Freiburg, Germany; Deutsches Konsortium für Translational Krebsforschung, Standort Freiburg, 79106 Freiburg, Germany.
Matthias MeierMicrofluidic and Biological Engineering, Department of Microsystems Engineering (IMTEK), University of Freiburg, 79110 Freiburg, Germany; Centre for Biological Signalling Studies (BIOSS), University of Freiburg, 79104 Freiburg, Germany; matthias.meier@imtek.de.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mammalian target of rapamycin (mTOR) is a central kinase integrating nutrient, energy, and metabolite signals. The kinase forms two distinct complexes: mTORC1 and mTORC2. mTORC1 plays an essential but undefined regulatory function for regeneration of adipose tissue. Analysis of mTOR in general is hampered by the complexity of regulatory mechanisms, including protein interactions and/or phosphorylation, in an ever-changing cellular microenvironment. Here, we developed a microfluidic large-scale integration chip platform for culturing and differentiating human adipose-derived stem cells (hASCs) in 128 separated microchambers under standardized nutrient conditions over 3 wk. The progression of the stem cell differentiation was measured by determining the lipid accumulation rates in hASC cultures. For in situ protein analytics, we developed a multiplex in situ proximity ligation assay (mPLA) that can detect mTOR in its two complexes selectively in single cells and implemented it on the same chip. With this combined technology, it was possible to reveal that the mTORC1 is regulated in its abundance, phosphorylation state, and localization in coordination with lysosomes during adipogenesis. High-content image analysis and parameterization of the in situ PLA signals in over 1 million cells cultured on four individual chips showed that mTORC1 and lysosomes are temporally and spatially coordinated but not in its composition during adipogenesis.

Indexed as

AdipogenesisAdult Stem CellsCells, CulturedHumansLab-On-A-Chip DevicesLysosomesMechanistic Target of Rapamycin Complex 1Mechanistic Target of Rapamycin Complex 1adipogenesismicrofluidicsmTORC1 regulationmultiplexed PLAstem cell differentiation

Identifiers

PMID27382182
PMCPMC4961165

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.