Evidence map›Paper›PMID 27382132›Full record

ArticleJournal of insect science (Online)2016

Genome-Wide Analysis of Host Responses to Four Different Types of Microorganisms in Bombyx Mori (Lepidoptera: Bombycidae).

Tingcai Cheng, Ping Lin, Lulin Huang, Yuqian Wu, Shengkai Jin, Chun Liu, Qingyou Xia

Open access · goldAbstract read
In one paragraph

Article in Journal of insect science (Online), 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
1.4field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed, 20 citations in OpenAlex.

  1. Review
  2. Identification of Peritrophins and Antiviral Effect ofInternational journal of molecular sciences · 2020
    Article
  3. Article
  4. Article
  5. Article
  6. Gene Expression Pattern and Regulatory Network ofInternational journal of genomics · 2019
    Article
  7. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Tingcai ChengState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400716, China (xiaqy@swu.edu.cn) and xiaqy@swu.edu.cn.
Ping LinState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400716, China (xiaqy@swu.edu.cn) and.
Lulin HuangState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400716, China (xiaqy@swu.edu.cn) and.
Yuqian WuState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400716, China (xiaqy@swu.edu.cn) and.
Shengkai JinState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400716, China (xiaqy@swu.edu.cn) and.
Chun LiuState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400716, China (xiaqy@swu.edu.cn) and.
Qingyou XiaState Key Laboratory of Silkworm Genome Biology, Southwest University, Chongqing 400716, China (xiaqy@swu.edu.cn) and xiaqy@swu.edu.cn.
Southwest University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Several pathogenic microorganisms have been used to investigate the genome-wide transcriptional responses of Bombyx mori to infection. However, studies have so far each focused on one microorganism, and systematic genome-wide comparison of transcriptional responses to different pathogenic microorganisms has not been undertaken. Here, we surveyed transcriptional responses of B. mori to its natural bacterial, viral, and fungal pathogens, Bacillus bombyseptieus, B. mori nucleopolyhedrovirus (BmNPV), and Beauveria bassiana, respectively, and to nonpathogenic Escherichia coli, by microarray analysis. In total, the expression of 2,436, 1,804, 1,743, and 912 B. mori genes was modulated by infection with B. bombyseptieus, BmNPV, B. bassiana, and E. coli, respectively. Notably, the expression of 620, 400, 177, or 165 of these genes was only modulated by infection with B. bombyseptieus, BmNPV, B. bassiana, or E. coli, respectively. In contrast to the expression of genes related to juvenile hormone synthesis and metabolism, that of genes encoding juvenile hormone binding proteins was microorganism-specific. Three basal metabolic pathways were modulated by infection with any of the four microorganisms, and 3, 14, 5, and 2 metabolic pathways were specifically modulated by infection with B. bombyseptieus, BmNPV, B. bassiana, and E. coli, respectively. Interestingly, BmNPV infection modulated the JAK/STAT signaling pathway, whereas both the Imd and Toll signaling pathways were modulated by infection with B. bombyseptieus, B. bassiana, or E. coli These results elucidate potential molecular mechanisms of the host response to different microorganisms, and provide a foundation for further work on host-pathogen interaction.

Indexed as

Transcription, GeneticAnimalsBacillusBeauveriaBombyxEscherichia coliGene Expression ProfilingHost-Pathogen InteractionsLarvaMicroarray AnalysisNucleopolyhedrovirusesSignal TransductionDNA microarraypathogenic microorganismsilkwormsystematic response

Identifiers

PMID27382132
PMCPMC4933498
OpenAlexW2460343820

What OpenQuestion holds

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LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.