Evidence map›Paper›PMID 27381634›Full record

ArticleNature communications2016

Envelope-specific B-cell populations in African green monkeys chronically infected with simian immunodeficiency virus.

Ruijun Zhang, David R Martinez, Quang N Nguyen, Justin Pollara, Trina Arifin, Christina Stolarchuk, Andrew Foulger, Josh D Amos, Robert Parks, Jonathon E Himes and 11 more

Open access · goldAbstract read
In one paragraph

Article in Nature communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 18 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

21 authors at 5 institutions in 2 countries.

Ruijun ZhangDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
David R MartinezDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Quang N NguyenDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Justin PollaraDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Trina ArifinDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Christina StolarchukDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Andrew FoulgerDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Josh D AmosDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Robert ParksDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Jonathon E HimesDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Minyue WangDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Regina W EdwardsDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Ashley M TramaDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Nathan VandergriftDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Lisa ColvinDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Ken DewarResearch Institute of the McGill University Health Centre, McGill University and Génome Québec Innovation Centre, Montreal, Québec, Canada H3A 0G1.
Nikoleta JureticResearch Institute of the McGill University Health Centre, McGill University and Génome Québec Innovation Centre, Montreal, Québec, Canada H3A 0G1.
Jessica WasserscheidResearch Institute of the McGill University Health Centre, McGill University and Génome Québec Innovation Centre, Montreal, Québec, Canada H3A 0G1.
Guido FerrariDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Hua-Xin LiaoDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Sallie R PermarDuke Human Vaccine Institute, Duke University School of Medicine, Durham, North Carolina 27710, USA.
Duke University · USDuke Medical Center · USMcGill University and Génome Québec Innovation Centre · CADuke University Hospital · USMcGill University Health Centre · CA

Funding

Viral Sequencing CoreU19AI067854 · NIAID · DUKE UNIVERSITY · PI BHARDWAJ, NINA · 2006 to 2011
$290.5M
Project 2: RNA vaccination in early life to induce potent and broad HIV Env-specific antibody responsesP01AI117915 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI DE PARIS, KRISTINA, PERMAR, SALLIE R. · 2015 to 2024
$21.2M
Viral and Host Determinants of HIV-1 TransmissionU01AI067854 · NIAID · DUKE UNIVERSITY · PI DOLIN, RAPHAEL · 2005 to 2005
$14.9M
Transmission-blocking potential of novel HIV Env-specific mucosal antibodiesR01AI106380 · NIAID · DUKE UNIVERSITY · PI PERMAR, SALLIE R. · 2013 to 2017
$3.4M
SIV-specific Immunity in breast milk during infection and after vaccinationK08AI087992 · NIAID · DUKE UNIVERSITY · PI PERMAR, SALLIE R. · 2009 to 2013
$568k
Antibody protection against SIV transmissionR21AI100760 · NIAID · DUKE UNIVERSITY · PI PERMAR, SALLIE R. · 2012 to 2013
$432k
NIAID NIH HHS K08 AI087992NIAID NIH HHS P01 AI117915NIAID NIH HHS R01 AI106380NIAID NIH HHS R21 AI100760NIAID NIH HHS U01 AI067854NIAID NIH HHS U19 AI067854
6 · The paper itself

Abstract

African green monkeys (AGMs) are natural primate hosts of simian immunodeficiency virus (SIV). Interestingly, features of the envelope-specific antibody responses in SIV-infected AGMs are distinct from that of HIV-infected humans and SIV-infected rhesus monkeys, including gp120-focused responses and rapid development of autologous neutralization. Yet, the lack of genetic tools to evaluate B-cell lineages hinders potential use of this unique non-human primate model for HIV vaccine development. Here we define features of the AGM Ig loci and compare the proportion of Env-specific memory B-cell populations to that of HIV-infected humans and SIV-infected rhesus monkeys. AGMs appear to have a higher proportion of Env-specific memory B cells that are mainly gp120 directed. Furthermore, AGM gp120-specific monoclonal antibodies display robust antibody-dependent cellular cytotoxicity and CD4-dependent virion capture activity. Our results support the use of AGMs to model induction of functional gp120-specific antibodies by HIV vaccine strategies.

Indexed as

AnimalsAntibodies, NeutralizingAntibodies, ViralB-LymphocytesCD4-Positive T-LymphocytesChlorocebus aethiopsChronic DiseaseCytotoxicity, ImmunologicGenetic VariationHIV Envelope Protein gp120HumansImmunity, CellularImmunoglobulinsImmunologic MemoryMacaca mulattaSimian Acquired Immunodeficiency SyndromeAntibodies, NeutralizingAntibodies, ViralHIV Envelope Protein gp120Immunoglobulins

Identifiers

PMID27381634
PMCPMC4935802
OpenAlexW2462706683

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.