Evidence map›Paper›PMID 27380975›Full record

ArticleIndian journal of ophthalmology2016

A novel splice donor site mutation in EPHA2 caused congenital cataract in a Chinese family.

Juan Bu, Sijie He, Lejin Wang, Jiankang Li, Jing Liu, Xiuqing Zhang

Open access · diamondAbstract read
In one paragraph

Article in Indian journal of ophthalmology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 15 citations in OpenAlex.

  1. Abnormal function ofInternational journal of ophthalmology · 2024
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  2. A mutatedInternational journal of ophthalmology · 2021
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  3. Functional analysis of deleteriousMolecular vision · 2021
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  4. Functional analysis of deleteriousMolecular vision · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Juan BuDepartment of Ophthalmology, Peking University Third Hospital, Key Laboratory of Vision Loss and Restoration, Ministry of Education, Beijing 100191, China.
Sijie HeBGI Education Center, University of Chinese Academy of Sciences, Shenzhen 518083; BGI-Shenzhen, Shenzhen 518083, China.
Lejin WangDepartment of Ophthalmology, Peking University Third Hospital, Key Laboratory of Vision Loss and Restoration, Ministry of Education, Beijing 100191, China.
Jiankang LiBGI-Shenzhen, Shenzhen 518083, China.
Jing LiuDepartment of Ophthalmology, Peking University Third Hospital, Key Laboratory of Vision Loss and Restoration, Ministry of Education, Beijing 100191, China.
Xiuqing ZhangBGI-Shenzhen, Shenzhen 518083; The Guangdong Enterprise Key Laboratory of Human Disease Genomics, Shenzhen 518083; Shenzhen Key Laboratory of Genomics, Shenzhen 518083, China.
BGI Group (China) · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundCongenital cataract is a rare disorder characterized by crystallin denaturation, which becomes a major cause of childhood blindness. Although more than fifty pathogenic genes for congenital cataract have been reported, the genetic causes of many cataract patients remain unknown. In this study, the aim is to identify the genetic cause of a five-generation Chinese autosomal dominant congenital cataract family.

methodsWhole exome sequencing (WES) was performed on three affected and one unaffected member of the family, known causative genes were scanned first. Sanger sequencing was used to validate co-segregation of the candidate variant in the family. The impact on the transcript and amino acid sequences of the variant was further analyzed.

resultsWe identified a novel splice donor site mutation c. 2825+1G >A in EPHA2 that was absent in public and in-house databases and showed co-segregation in the family. This variant resulted in an altered splice that led to protein truncation.

conclusionsThe mutation we identified was responsible for congenital cataract in our studied family. Our findings broaden the spectrum of causative mutations in EPHA2 gene for congenital cataract and suggest that WES is an efficient strategy to scan variants in known causative genes for genetically heterogeneous diseases.

Indexed as

MutationAdolescentAdultAgedCataractChildChild, PreschoolChinaDNA Mutational AnalysisFemaleHumansIncidenceMaleMiddle AgedPedigreeReceptor, EphA2Receptor, EphA2RNA Splice Sites

Identifiers

PMID27380975
PMCPMC4966373
OpenAlexW2467501126

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.