ArticleScientific reports2016
Pronounced genetic differentiation and recent secondary contact in the mangrove tree Lumnitzera racemosa revealed by population genomic analyses.
Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.
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11 citing papers in PubMed.
- Genome Assembly of Three Shrub Mangroves in the Genus Acanthus Reveals Two Polyploidy Events and Expansion of Genes Linked to Root Adaptation in Coastal Habitats.GigaScience · 2026Article
- Establishing community-wide DNA barcode references for conserving mangrove forests in China.BMC plant biology · 2021Article
- Analysis of rDNA reveals a high genetic diversity of Halophila major in the Wallacea region.PloS one · 2021Article
- Contrasting Phylogeographic Patterns inFrontiers in plant science · 2021Article
- Low genetic diversity indicating the threatened status of Rhizophora apiculata (Rhizophoraceae) in Malaysia: declined evolution meets habitat destruction.Scientific reports · 2020Article
- Land masses and oceanic currents drive population structure ofEcology and evolution · 2020Article
- Chloroplast Genome Sequences and Comparative Analyses of Combretaceae Mangroves with Related Species.BioMed research international · 2020Article
- Population genetic structure, introgression, and hybridization in the genusEcology and evolution · 2018Article
- Comparative transcriptional profiling of tildipirosin-resistant and sensitive Haemophilus parasuis.Scientific reports · 2017Article
- Comparative Analysis of the Pattern of Population Genetic Diversity in Three Indo-West PacificFrontiers in plant science · 2016Article
- Ancient Geographical Barriers Drive Differentiation amongFrontiers in plant science · 2016Article
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Abstract
Systematically investigating the impacts of Pleistocene sea-level fluctuations on mangrove plants may provide a better understanding of their demographic history and useful information for their conservation. Therefore, we conducted population genomic analyses of 88 nuclear genes to explore the population dynamics of a mangrove tree Lumnitzera racemosa across the Indo-West Pacific region. Our results revealed pronounced genetic differentiation in this species between the populations from the Indian Ocean and the Pacific Ocean, which may be attributable to the long-term isolation between the western and eastern coasts of the Malay Peninsula during sea-level drops in the Pleistocene glacial periods. The mixing of haplotypes from the two highly divergent groups was identified in a Cambodian population at almost all 88 nuclear genes, suggesting genetic admixture of the two lineages at the boundary region. Similar genetic admixture was also found in other populations from Southeast Asia based on the Bayesian clustering analysis of six nuclear genes, which suggests extensive and recent secondary contact of the two divergent lineages in Southeast Asia. Computer simulations indicated substantial migration from the Indian Ocean towards the South China Sea, which likely results in the genetic admixture in Southeast Asia.
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