Evidence map›Paper›PMID 27380887›Full record

ArticleScientific reports2016

Genome-wide analysis of DNA methylation during antagonism of DMOG to MnCl2-induced cytotoxicity in the mouse substantia nigra.

Nannan Yang, Yang Wei, Tan Wang, Jifeng Guo, Qiying Sun, Yacen Hu, Xinxiang Yan, Xiongwei Zhu, Beisha Tang, Qian Xu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 19 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Review
  5. Epigenetics in neurodegenerative disorders induced by pesticides.Genes and environment : the official journal of the Japanese Environmental Mutagen Society · 2021
    Review
  6. Review
  7. Molecular Targets of Manganese-Induced Neurotoxicity: A Five-Year Update.International journal of molecular sciences · 2021
    Review
  8. Tissue-Resident Alveolar Macrophages Do Not Rely on Glycolysis for LPS-induced Inflammation.American journal of respiratory cell and molecular biology · 2020
    Article
  9. Article
  10. Implications of DNA Methylation in Parkinson's Disease.Frontiers in molecular neuroscience · 2017
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 2 countries.

Nannan YangDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, 410008 Hunan, People's Republic of China.
Yang WeiDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, 410008 Hunan, People's Republic of China.
Tan WangDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, 410008 Hunan, People's Republic of China.
Jifeng GuoDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, 410008 Hunan, People's Republic of China.
Qiying SunDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, 410008 Hunan, People's Republic of China.
Yacen HuDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, 410008 Hunan, People's Republic of China.
Xinxiang YanDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, 410008 Hunan, People's Republic of China.
Xiongwei ZhuInstitute of Pathology, Case Western Reserve University, Cleveland, OH 44106. USA.
Beisha TangDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, 410008 Hunan, People's Republic of China.
Qian XuDepartment of Neurology, Xiangya Hospital, Central South University, Changsha, 410008 Hunan, People's Republic of China.
Xiangya Hospital Central South University · CNCentral South University · CNCase Western Reserve University · USChangsha Medical University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Exposure to excessive manganese (Mn) causes manganism, a progressive neurodegenerative disorder similar to idiopathic Parkinson's disease (IPD). The detailed mechanisms of Mn neurotoxicity in nerve cells, especially in dopaminergic neurons are not yet fully understood. Meanwhile, it is unknown whether there exists a potential antagonist or effective drug for treating neuron damage in manganism. In the present study, we report the discovery of an HIF prolyl-hydroxylase inhibitor, DMOG [N-(2-Methoxy-2-oxoacetyl) glycine methyl ester], that can partially inhibit manganese toxicity not only in the neuroblastoma cell line SH-SY5Y in vitro but also in a mouse model in vivo. A genome-wide methylation DNA analysis was performed using microarray hybridization. Intriguingly, DNA methylation in the promoter region of 226 genes was found to be regulated by MnCl2, while the methylation effects of MnCl2 could be restored with combinatorial DMOG treatment. Furthermore, we found that genes with converted promoter methylation during DMOG antagonism were associated across several categories of molecular function, including mitochondria integrity maintain, cell cycle and DNA damage response, and ion transportation. Collectively, our results serve as the basis of a mechanism analysis of neuron damage in manganism and may supply possible gene targets for clinical therapy.

Indexed as

Genome-Wide Association StudyAmino Acids, DicarboxylicAnimalsBehavior, AnimalBrainCell Line, TumorCell SurvivalChloridesDNA MethylationDose-Response Relationship, DrugHumansMaleManganese CompoundsMiceMice, Inbred C57BLNeuroblastomaAmino Acids, DicarboxylicChloridesmanganese chlorideManganese CompoundsoxalylglycineTyrosine 3-Monooxygenase

Identifiers

PMID27380887
PMCPMC4933877
OpenAlexW2466035652

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.