Evidence map›Paper›PMID 27380381›Full record

ArticleFish physiology and biochemistry2016

Molecular characterization and expression analysis of AMPK α subunit isoform genes from Scophthalmus maximus responding to salinity stress.

Lin Zeng, Bin Liu, Chang-Wen Wu, Ji-Lin Lei, Mei-Ying Xu, Ai-Yi Zhu, Jian-She Zhang, Wan-Shu Hong

Abstract read
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In one paragraph

Article in Fish physiology and biochemistry, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 31 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 1 country.

Lin ZengNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, 316000, China.
Bin LiuNational Technology System for Flatfish Culture Industry, Chinese Ministry of Agriculture, Qingdao, 266071, China.
Chang-Wen WuNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, 316000, China.
Ji-Lin LeiNational Technology System for Flatfish Culture Industry, Chinese Ministry of Agriculture, Qingdao, 266071, China. leijilin@seacul.com.
Mei-Ying XuNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, 316000, China.
Ai-Yi ZhuNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, 316000, China.
Jian-She ZhangNational Engineering Research Center for Marine Aquaculture, Zhejiang Ocean University, Zhoushan, 316000, China.
Wan-Shu HongCollege of Ocean and Earth Sciences, Xiamen University, Xiamen, 361005, China.
Zhejiang Ocean University · CNChinese Academy of Fishery Sciences · CNXiamen University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

AMP-activated protein kinase (AMPK) is a highly conserved and multi-functional protein kinase that plays important roles in both intracellular energy balance and cellular stress response. In the present study, molecular characterization, tissue distribution and gene expression levels of the AMPK α1 and α2 genes from turbot (Scophthalmus maximus) under salinity stress are described. The complete coding regions of the AMPK α1 and α2 genes were isolated from turbot through degenerate primers in combination with RACE using muscle cDNA. The complete coding regions of AMPK α1 (1722 bp) and α2 (1674 bp) encoded 573 and 557 amino acids peptides, respectively. Multiple alignments, structural analysis and phylogenetic tree construction indicated that S. maximus AMPK α1 and α2 shared a high amino acid identity with other species, especially fish. AMPK α1 and α2 genes could be detected in all tested tissues, indicating that they are constitutively expressed. Salinity challenges significantly altered the gene expression levels of AMPK α1 and α2 mRNA in a salinity- and time-dependent manners in S. maximus gill tissues, suggesting that AMPK α1 and α2 played important roles in mediating the salinity stress in S. maximus. The expression levels of AMPK α1 and α2 mRNA were a positive correlation with gill Na

Indexed as

SalinityAmino Acid SequenceAMP-Activated Protein KinasesAnimalsBase SequenceDNA, ComplementaryFish ProteinsFlatfishesGene ExpressionGillsPhylogenyProtein IsoformsRNA, MessengerSodium-Potassium-Exchanging ATPaseStress, PhysiologicalAMP-Activated Protein KinasesDNA, ComplementaryFish ProteinsProtein IsoformsRNA, MessengerSodium-Potassium-Exchanging ATPaseAMPKNa+ K+-ATPase activityRACESalinityScophthalmus maximus

Identifiers

PMID27380381
OpenAlexW2427985003

What OpenQuestion holds

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Read underepoch 390

Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.