Evidence map›Paper›PMID 27380368›Full record

ArticleActa crystallographica. Section F, Structural biology communications2016

Crystal structure of the cyan fluorescent protein Cerulean-S175G.

Sang Wook Park, Sunghyun Kang, Tae Sung Yoon

Abstract read
In one paragraph

Article in Acta crystallographica. Section F, Structural biology communications, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact, top 97% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed, 3 citations in OpenAlex.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Sang Wook ParkBio-Analytical Science Major, Korea University of Science and Technology, KRIBB Campus, 125 Gwahak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.
Sunghyun KangBio-Analytical Science Major, Korea University of Science and Technology, KRIBB Campus, 125 Gwahak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.
Tae Sung YoonBio-Analytical Science Major, Korea University of Science and Technology, KRIBB Campus, 125 Gwahak-ro, Yuseong-gu, Daejeon 34141, Republic of Korea.
Korea University of Science and Technology · KRKorea Research Institute of Bioscience and Biotechnology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Enhanced cyan fluorescent protein (ECFP) was derived from Aequorea victoria green fluorescent protein (avGFP), notably with S65T/Y66W mutations. Its chromophore consists of a tripeptide comprised of Thr65, Trp66 and Gly67 (TWG) residues, while that of avGFP consists of a Ser65, Tyr66 and Gly67 (SYG) tripeptide. Cerulean and SCFP3A were derived from ECFP-S72A/H148D (a double mutation) with additional Y145A and S175G mutations, respectively, while Cerulean-S175G has both mutations (Y145A and S175G). The crystal structures of these ECFP variants at neutral pH were reported to adopt two distinct major conformations called ECFP and Cerulean. In this study, Cerulean-S175G was revealed to adopt only the Cerulean conformation, while Cerulean has been reported to adopt both the ECFP and the Cerulean conformations in its crystal structures. Sharing the same S175G mutation with SCFP3A, Cerulean-S175G showed a slightly increased quantum yield, like SCFP3A, but did not adopt the ECFP conformation adopted by SCFP3A. Detailed comparison of Cerulean-S175G and other ECFP variants revealed that the notable conformational changes in ECFP variants can be understood mainly in terms of the interaction between the Trp66 residue of the chromophore and residues 145-148 of β-strand 7.

Indexed as

Amino Acid SubstitutionAmino Acid SequenceAnimalsCloning, MolecularCrystallography, X-RayEscherichia coliFluorescent DyesGene ExpressionGenetic VectorsGreen Fluorescent ProteinsHydrozoaModels, MolecularMutationProtein Conformation, alpha-HelicalProtein Conformation, beta-StrandProtein Interaction Domains and Motifsenhanced cyan fluorescent proteinFluorescent DyesGreen Fluorescent ProteinsProtein IsoformsRecombinant ProteinsCerulean-S175Genhanced cyan fluorescent proteinfluorescence lifetime imaging microscopyfluorescence resonance energy transferfluorophores

Identifiers

PMID27380368
PMCPMC4933001
OpenAlexW2470807039

What OpenQuestion holds

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.