Evidence map›Paper›PMID 27378903›Full record

ArticleFrontiers in neuroinformatics2016

An Automatic Method for Nucleus Boundary Segmentation Based on a Closed Cubic Spline.

Zhao Feng, Anan Li, Hui Gong, Qingming Luo

Abstract read
In one paragraph

Article in Frontiers in neuroinformatics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Zhao FengBritton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics- Huazhong University of Science and TechnologyWuhan, China; Key Laboratory of Biomedical Photonics of Ministry of Education, College of Life Science and Technology, Huazhong University of Science and TechnologyWuhan, China.
Anan LiBritton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics- Huazhong University of Science and TechnologyWuhan, China; Key Laboratory of Biomedical Photonics of Ministry of Education, College of Life Science and Technology, Huazhong University of Science and TechnologyWuhan, China.
Hui GongBritton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics- Huazhong University of Science and TechnologyWuhan, China; Key Laboratory of Biomedical Photonics of Ministry of Education, College of Life Science and Technology, Huazhong University of Science and TechnologyWuhan, China.
Qingming LuoBritton Chance Center for Biomedical Photonics, Wuhan National Laboratory for Optoelectronics- Huazhong University of Science and TechnologyWuhan, China; Key Laboratory of Biomedical Photonics of Ministry of Education, College of Life Science and Technology, Huazhong University of Science and TechnologyWuhan, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The recognition of brain nuclei is the basis for localizing brain functions. Traditional histological research, represented by atlas illustration, achieves the goal of nucleus boundary recognition by manual delineation, but it has become increasingly difficult to extend this handmade method to delineating brain regions and nuclei from large datasets acquired by the recently developed single-cell-resolution imaging techniques for the whole brain. Here, we propose a method based on a closed cubic spline (CCS), which can automatically segment the boundaries of nuclei that differ to a relatively high degree in cell density from the surrounding areas and has been validated on model images and Nissl-stained microimages of mouse brain. It may even be extended to the segmentation of target outlines on MRI or CT images. The proposed method for the automatic extraction of nucleus boundaries would greatly accelerate the illustration of high-resolution brain atlases.

Indexed as

automaticbrainclosed cubic splinehistological imagenucleus segmentation

Identifiers

PMID27378903
PMCPMC4910025

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.