Evidence map›Paper›PMID 27377776›Full record

ArticleAnaerobe2016

Heat shock increases conjugation efficiency in Clostridium difficile.

Joseph A Kirk, Robert P Fagan

Abstract read
In one paragraph

Article in Anaerobe, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed.

  1. Defining the order of assembly of theJournal of bacteriology · 2026
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  2. A programmed reset mechanism primesScience advances · 2026
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  3. Phase variable colony morphotypes ofInfection and immunity · 2026
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  4. A set of genetic tools for use inMicrobiology (Reading, England) · 2026
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  5. Defining the order of assembly of thebioRxiv : the preprint server for biology · 2026
    Article
  6. Phase variable colony morphotypes ofbioRxiv : the preprint server for biology · 2026
    Article
  7. Nanoluciferase-Based Reporters for Clostridioides difficile.Methods in molecular biology (Clifton, N.J.) · 2026
    Article
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  15. Assessing horizontal gene transfer in the rhizosphere ofApplied and environmental microbiology · 2024
    Article
  16. Microbiology spectrum · 2024
    Article
  17. Article
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  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Joseph A KirkKrebs Institute, Department of Molecular Biology and Biotechnology, University of Sheffield, Sheffield, S10 2TN, UK. Electronic address: Jakirk1@sheffield.ac.uk.
Robert P FaganKrebs Institute, Department of Molecular Biology and Biotechnology, University of Sheffield, Sheffield, S10 2TN, UK. Electronic address: r.fagan@sheffield.ac.uk.

Funding

Medical Research Council MR/N000900/1
6 · The paper itself

Abstract

Clostridium difficile infection has increased in incidence and severity over the past decade, and poses a unique threat to human health. However, genetic manipulation of C. difficile remains in its infancy and the bacterium remains relatively poorly characterised. Low-efficiency conjugation is currently the only available method for transfer of plasmid DNA into C. difficile. This is practically limiting and has slowed progress in understanding this important pathogen. Conjugation efficiency varies widely between strains, with important clinically relevant strains such as R20291 being particularly refractory to plasmid transfer. Here we present an optimised conjugation method in which the recipient C. difficile is heat treated prior to conjugation. This significantly improves conjugation efficiency in all C. difficile strains tested including R20291. Conjugation efficiency was also affected by the choice of media on which conjugations were performed, with standard BHI media giving most transconjugant recovery. Using our optimised method greatly increased the ease with which the chromosome of R20291 could be precisely manipulated by homologous recombination. Our method improves on current conjugation protocols and will help speed genetic manipulation of strains otherwise difficult to work with.

Indexed as

Conjugation, GeneticHomologous RecombinationChromosomes, BacterialClostridioides difficileClostridium InfectionsCulture MediaHot TemperatureHumansPlasmidsRibotypingTransformation, BacterialCulture MediaClostridium difficileConjugationPCR ribotype 027

Identifiers

PMID27377776
PMCPMC5154368

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.