ArticleScientific data2016
A catalogue of 136 microbial draft genomes from Red Sea metagenomes.
Article in Scientific data, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 37 papers.
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37 citing papers in PubMed.
- Article
- Decoding microbial diversity, biogeochemical functions, and interaction potentials in red sea hydrothermal vents.Environmental microbiome · 2025Article
- Novel, active, and uncultured hydrocarbon-degrading microbes in the ocean.Applied and environmental microbiology · 2024Article
- Metagenome sequencing and 107 microbial genomes from seamount sediments along the Yap and Mariana trenches.Scientific data · 2024Article
- Characterization of the Environmental Plasmidome of the Red Sea.Microbiology spectrum · 2023Article
- Metagenome sequencing and 103 microbial genomes from ballast water and sediments.Scientific data · 2023Article
- Trait biases in microbial reference genomes.Scientific data · 2023Article
- Evolutionary pathways for deep-sea adaptation in marine planktonicFrontiers in microbiology · 2023Article
- Validation of the application of gel beads-based single-cell genome sequencing platform to soil and seawater.ISME communications · 2022Article
- The OceanDNA MAG catalog contains over 50,000 prokaryotic genomes originated from various marine environments.Scientific data · 2022Article
- Article
- A cautionary signal from the Red Sea on the impact of increased dust activity on marine microbiota.BMC genomics · 2022Article
- Article
- Seasonal and annual changes in the microbial communities of Ofunato Bay, Japan, based on metagenomics.Scientific reports · 2021Article
- Metapangenomics reveals depth-dependent shifts in metabolic potential for the ubiquitous marine bacterial SAR324 lineage.Microbiome · 2021Article
- 309 metagenome assembled microbial genomes from deep sediment samples in the Gulfs of Kathiawar Peninsula.Scientific data · 2021Article
- Transcriptional activity differentiates families of Marine Group II Euryarchaeota in the coastal ocean.ISME communications · 2021Article
- A total of 219 metagenome-assembled genomes of microorganisms from Icelandic marine waters.PeerJ · 2021Article
- Natural Products Repertoire of the Red Sea.Marine drugs · 2020Review
- Ecogenomics of the SAR11 clade.Environmental microbiology · 2020Article
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5 authors.
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No grant is acknowledged in the PubMed record.
Abstract
Earth is expected to continue warming and the Red Sea is a model environment for understanding the effects of global warming on ocean microbiomes due to its unusually high temperature, salinity and solar irradiance. However, most microbial diversity analyses of the Red Sea have been limited to cultured representatives and single marker gene analyses, hence neglecting the substantial uncultured majority. Here, we report 136 microbial genomes (completion minus contamination is ≥50%) assembled from 45 metagenomes from eight stations spanning the Red Sea and taken from multiple depths between 10 to 500 m. Phylogenomic analysis showed that most of the retrieved genomes belong to seven different phyla of known marine microbes, but more than half representing currently uncultured species. The open-access data presented here is the largest number of Red Sea representative microbial genomes reported in a single study and will help facilitate future studies in understanding the physiology of these microorganisms and how they have adapted to the relatively harsh conditions of the Red Sea.
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