Evidence map›Paper›PMID 27377502›Full record

ArticleThe Indian journal of medical research2016

Association of CDKAL1, CDKN2A/B & HHEX gene polymorphisms with type 2 diabetes mellitus in the population of Hyderabad, India.

Uma Jyothi Kommoju, Subburaj Kadarkarai Samy, Jayaraj Maruda, Kumuda Irgam, Jaya Prasad Kotla, Lakshmi Velaga, Battini Mohan Reddy

Open access · diamondAbstract read
In one paragraph

Article in The Indian journal of medical research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 24 citations in OpenAlex.

  1. Review
  2. Contribution of genetic variant identified inSaudi journal of biological sciences · 2022
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  7. Association Between Single Nucleotide Polymorphisms inDiabetes, metabolic syndrome and obesity : targets and therapy · 2020
    Article
  8. Deciphering the role of circulating lncRNAs: RNCR2, NEAT2, CDKN2B-AS1, and PVT1 and the possible prediction of anti-VEGF treatment outcomes in diabetic retinopathy patients.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2019
    Article
  9. Review
  10. Article
  11. Article
4 · The record

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5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Uma Jyothi KommojuMolecular Anthropology Group, Biological Anthropology Unit, Indian Statistical Institute, Hyderabad, India.
Subburaj Kadarkarai SamyMolecular Anthropology Group, Biological Anthropology Unit, Indian Statistical Institute, Hyderabad, India.
Jayaraj MarudaMolecular Anthropology Group, Biological Anthropology Unit, Indian Statistical Institute, Hyderabad, India.
Kumuda IrgamMolecular Anthropology Group, Biological Anthropology Unit, Indian Statistical Institute, Hyderabad, India.
Jaya Prasad KotlaJP Endocrine Center, Hyderabad, India.
Lakshmi VelagaDepartment of Human Genetics, Andhra University, Visakhapatnam, India.
Battini Mohan ReddyMolecular Anthropology Group, Biological Anthropology Unit, Indian Statistical Institute, Hyderabad, India.
Indian Statistical Institute · INAndhra University · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

BACKGROUND &

objectivesThe genome-wide association studies (GWAS) have shown an association of type 2 diabetes mellitus (T2DM) with several novel genes. We report here the findings on the pattern of genetic association of three genes (CDKAL1, CDKN2A/B and HHEX) with T2DM in the population of Hyderabad, south India.

methodsA sample of 1379 individuals (758 T2DM cases and 621 controls) from Hyderabad, India, were genotyped for five single nucleotide polymorphisms (SNPs) of CDKAL1 (rs7754840, rs7756992) CDKN2A/B (rs10811661) and HHEX (rs1111875, rs7923837) genes on Sequenom Mass Array platform.

resultsThe risk allele frequencies of the CDKAL1 and CDKN2A/B SNPs were relatively higher in cases than in the controls and the logistic regression analysis yielded significant odds ratios suggesting that the variant alleles conferred risk for developing T2DM in this population. the HHEX gene did not show either allelic or genotypic association with T2DM. The multivariate logistic regression analysis with reference to both alleles and genotypes of CDKAL1 SNPs showed significant association, suggesting an important role for this gene in the T2DM pathophysiology. INTERPRETATION &

conclusionsA significant association was seen of all the three SNPs of CDKAL1 and CDKN2A/B genes with T2DM but none of the two SNPs of HHEX. Further studies are required to cross-validate our findings in a relatively larger sample. It is also necessary to explore other SNPs of HHEX gene to unequivocally establish the pattern of association of this gene with T2DM in this population.

Indexed as

AdultAgedAged, 80 and overCyclin-Dependent Kinase Inhibitor p16Cyclin-Dependent Kinase Inhibitor p18Diabetes Mellitus, Type 2FemaleGene FrequencyGenetic Predisposition to DiseaseGenome-Wide Association StudyGenotypeHomeodomain ProteinsHumansIndiaMaleMiddle AgedCDKAL1 protein, humanCDKN2A protein, humanCyclin-Dependent Kinase Inhibitor p16Cyclin-Dependent Kinase Inhibitor p18HHEX protein, humanHomeodomain ProteinsTranscription FactorstRNA Methyltransferases

Identifiers

PMID27377502
PMCPMC4928552
OpenAlexW2466554125

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.