Evidence map›Paper›PMID 27375953›Full record

ArticleBiomedical optics express2016

Cell morphology-based classification of red blood cells using holographic imaging informatics.

Faliu Yi, Inkyu Moon, Bahram Javidi

Open access · goldAbstract read
In one paragraph

Article in Biomedical optics express, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
6.2field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 84 citations in OpenAlex.

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  15. Robust Method for Semantic Segmentation of Whole-Slide Blood Cell Microscopic Images.Computational and mathematical methods in medicine · 2020
    Article
  16. Article
  17. Noninvasive detection of macrophage activation with single-cell resolution through machine learning.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 2 countries.

Faliu YiDepartment of Computer Engineering, Chosun University, 309 Pilmun-daero, Dong-gu, Gwangju 501-759, South Korea.
Inkyu MoonDepartment of Computer Engineering, Chosun University, 309 Pilmun-daero, Dong-gu, Gwangju 501-759, South Korea.
Bahram JavidiDepartment of Electrical and Computer Engineering, U-2157, University of Connecticut, Storrs, Connecticut 06269, USA.
Chosun University · KRUniversity of Connecticut · US

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We present methods that automatically select a linear or nonlinear classifier for red blood cell (RBC) classification by analyzing the equality of the covariance matrices in Gabor-filtered holographic images. First, the phase images of the RBCs are numerically reconstructed from their holograms, which are recorded using off-axis digital holographic microscopy (DHM). Second, each RBC is segmented using a marker-controlled watershed transform algorithm and the inner part of the RBC is identified and analyzed. Third, the Gabor wavelet transform is applied to the segmented cells to extract a series of features, which then undergo a multivariate statistical test to evaluate the equality of the covariance matrices of the different shapes of the RBCs using selected features. When these covariance matrices are not equal, a nonlinear classification scheme based on quadratic functions is applied; otherwise, a linear classification is applied. We used the stomatocyte, discocyte, and echinocyte RBC for classifier training and testing. Simulation results demonstrated that 10 of the 14 RBC features are useful in RBC classification. Experimental results also revealed that the covariance matrices of the three main RBC groups are not equal and that a nonlinear classification method has a much lower misclassification rate. The proposed automated RBC classification method has the potential for use in drug testing and the diagnosis of RBC-related diseases.

Indexed as

(090.1995) Digital holography(100.5010) Pattern recognition(100.6890) Three-dimensional image processing(150.0150) Machine vision(150.1135) Algorithms(170.1530) Cell analysis(170.3880) Medical and biological imaging

Identifiers

PMID27375953
PMCPMC4918591
OpenAlexW2406222041

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.