Evidence map›Paper›PMID 27375628›Full record

ArticleFrontiers in plant science2016

3D Surface Reconstruction of Plant Seeds by Volume Carving: Performance and Accuracies.

Johanna Roussel, Felix Geiger, Andreas Fischbach, Siegfried Jahnke, Hanno Scharr

Abstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Johanna RousselInstitute of Bio- and Geo-sciences, IBG-2: Plant Sciences, Forschungszentrum Jülich GmbH Jülich, Germany.
Felix GeigerInstitute of Bio- and Geo-sciences, IBG-2: Plant Sciences, Forschungszentrum Jülich GmbH Jülich, Germany.
Andreas FischbachInstitute of Bio- and Geo-sciences, IBG-2: Plant Sciences, Forschungszentrum Jülich GmbH Jülich, Germany.
Siegfried JahnkeInstitute of Bio- and Geo-sciences, IBG-2: Plant Sciences, Forschungszentrum Jülich GmbH Jülich, Germany.
Hanno ScharrInstitute of Bio- and Geo-sciences, IBG-2: Plant Sciences, Forschungszentrum Jülich GmbH Jülich, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

We describe a method for 3D reconstruction of plant seed surfaces, focusing on small seeds with diameters as small as 200 μm. The method considers robotized systems allowing single seed handling in order to rotate a single seed in front of a camera. Even though such systems feature high position repeatability, at sub-millimeter object scales, camera pose variations have to be compensated. We do this by robustly estimating the tool center point from each acquired image. 3D reconstruction can then be performed by a simple shape-from-silhouette approach. In experiments we investigate runtimes, theoretically achievable accuracy, experimentally achieved accuracy, and show as a proof of principle that the proposed method is well sufficient for 3D seed phenotyping purposes.

Indexed as

Arabidopsisautomated seed handlingimage processingperformance analysissilhouette

Identifiers

PMID27375628
PMCPMC4895124

What OpenQuestion holds

Textmetadata
LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.