Evidence map›Paper›PMID 27375627›Full record

ArticleFrontiers in plant science2016

Identification and Characterization of Five BAHD Acyltransferases Involved in Hydroxycinnamoyl Ester Metabolism in Chicory.

Guillaume Legrand, Marianne Delporte, Chahinez Khelifi, Adeline Harant, Christophe Vuylsteker, Monika Mörchen, Philippe Hance, Jean-Louis Hilbert, David Gagneul

Open access · goldAbstract read
In one paragraph

Article in Frontiers in plant science, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 32 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
32citing papers in PubMed, 1 pooled it
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

32 citing papers in PubMed, 1 synthesis or guideline pooled it, 63 citations in OpenAlex.

  1. Genome-Wide Datasets of Chicories (International journal of molecular sciences · 2023
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  16. Biostimulant Effects ofFrontiers in plant science · 2022
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Guillaume LegrandAgro-Food and Biotechnology Research Institute, EA 7394, Charles Viollette Research Institute, Université de Lille 1 Villeneuve d'Ascq, France.
Marianne DelporteAgro-Food and Biotechnology Research Institute, EA 7394, Charles Viollette Research Institute, Université de Lille 1 Villeneuve d'Ascq, France.
Chahinez KhelifiAgro-Food and Biotechnology Research Institute, EA 7394, Charles Viollette Research Institute, Université de Lille 1 Villeneuve d'Ascq, France.
Adeline HarantAgro-Food and Biotechnology Research Institute, EA 7394, Charles Viollette Research Institute, Université de Lille 1 Villeneuve d'Ascq, France.
Christophe VuylstekerAgro-Food and Biotechnology Research Institute, EA 7394, Charles Viollette Research Institute, Université de Lille 1 Villeneuve d'Ascq, France.
Monika MörchenAgro-Food and Biotechnology Research Institute, EA 7394, Charles Viollette Research Institute, Université de Lille 1 Villeneuve d'Ascq, France.
Philippe HanceAgro-Food and Biotechnology Research Institute, EA 7394, Charles Viollette Research Institute, Université de Lille 1 Villeneuve d'Ascq, France.
Jean-Louis HilbertAgro-Food and Biotechnology Research Institute, EA 7394, Charles Viollette Research Institute, Université de Lille 1 Villeneuve d'Ascq, France.
David GagneulAgro-Food and Biotechnology Research Institute, EA 7394, Charles Viollette Research Institute, Université de Lille 1 Villeneuve d'Ascq, France.
Institut Charles Viollette · FRUniversité de Lille · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Chicory (Cichorium intybus) accumulates caffeic acid esters with important significance for human health. In this study, we aim at a better understanding of the biochemical pathway of these bioactive compounds. Detailed metabolic analysis reveals that C. intybus predominantly accumulates caftaric and chicoric acids in leaves, whereas isochlorogenic acid (3,5-diCQA) was almost exclusively accumulated in roots. Chlorogenic acid (3-CQA) was equally distributed in all organs. Interestingly, distribution of the four compounds was related to leaf age. Induction with methyljasmonate (MeJA) of root cell suspension cultures results in an increase of 3-CQA and 3,5-diCQA contents. Expressed sequence tag libraries were screened using members of the BAHD family identified in Arabidopsis and tobacco as baits. The full-length cDNAs of five genes were isolated. Predicted amino acid sequence analyses revealed typical features of BAHD family members. Biochemical characterization of the recombinant proteins expressed in Escherichia coli showed that two genes encode HCTs (hydroxycinnamoyl-CoA:shikimate/quinate hydroxycinnamoyltransferases, HCT1 and HCT2) whereas, three genes encode HQTs (hydroxycinnamoyl-CoA:quinate hydroxycinnamoyltransferases, HQT1, HQT2, and HQT3). These results totally agreed with the phylogenetic analysis done with the predicted amino acid sequences. Quantitative real-time polymerase chain reaction analysis of gene expression indicated that HQT3, HCT1, and HCT2 might be more directly associated with CQA accumulation in cell culture in response to MeJA elicitation. Transient expression of HCT1 and HQT1 in tobacco resulted in a higher production of 3-CQA. All together these data confirm the involvement of functionally redundant genes in 3-CQA and related compound synthesis in the Asteraceae family.

Indexed as

acyltransferasesBAHD familycaffeic acid esterschicory (Cichorium intybus)chlorogenic acidfunctionally redundant genes

Identifiers

PMID27375627
PMCPMC4893494
OpenAlexW2416389735

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.