Evidence map›Paper›PMID 27375356›Full record

ArticleEvolutionary bioinformatics online2016

Twenty-Five New Viruses Associated with the Drosophilidae (Diptera).

Claire L Webster, Ben Longdon, Samuel H Lewis, Darren J Obbard

Open access · goldAbstract read
In one paragraph

Article in Evolutionary bioinformatics online, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 73 papers.

0numbers the graph read from it
0cells of the map it votes in
73citing papers in PubMed
17.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

73 citing papers in PubMed, 111 citations in OpenAlex.

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  11. Naturally occurring viruses ofProceedings. Biological sciences · 2024
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  14. Viruses in LaboratoryViruses · 2023
    Article
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13 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Claire L WebsterInstitute of Evolutionary Biology, The University of Edinburgh, Edinburgh, UK.; Evolution, behaviour and environment, School of Life Sciences, University of Sussex, Brighton, UK.
Ben LongdonDepartment of Genetics, University of Cambridge, Cambridge, UK.
Samuel H LewisInstitute of Evolutionary Biology, The University of Edinburgh, Edinburgh, UK.; Department of Genetics, University of Cambridge, Cambridge, UK.
Darren J ObbardInstitute of Evolutionary Biology, The University of Edinburgh, Edinburgh, UK.; Centre for Immunity, Infection and Evolution, The University of Edinburgh, Edinburgh, UK.
University of Cambridge · GBCentre for Immunity, Infection and Evolution · GBUniversity of Edinburgh · GB

Funding

European Research Council 281668Wellcome Trust
6 · The paper itself

Abstract

Drosophila melanogaster is an important laboratory model for studies of antiviral immunity in invertebrates, and Drosophila species provide a valuable system to study virus host range and host switching. Here, we use metagenomic RNA sequencing of about 1600 adult flies to discover 25 new RNA viruses associated with six different drosophilid hosts in the wild. We also provide a comprehensive listing of viruses previously reported from the Drosophilidae. The new viruses include Iflaviruses, Rhabdoviruses, Nodaviruses, and Reoviruses, and members of unclassified lineages distantly related to Negeviruses, Sobemoviruses, Poleroviruses, Flaviviridae, and Tombusviridae. Among these are close relatives of Drosophila X virus and Flock House virus, which we find in association with wild Drosophila immigrans. These two viruses are widely used in experimental studies but have not been previously reported to naturally infect Drosophila. Although we detect no new DNA viruses, in D. immigrans and Drosophila obscura, we identify sequences very closely related to Armadillidium vulgare iridescent virus (Invertebrate iridescent virus 31), bringing the total number of DNA viruses found in the Drosophilidae to three.

Indexed as

DrosophilaDrosophila X virusFlock House virusmetagenomicstranscriptomevirus

Identifiers

PMID27375356
PMCPMC4915790
OpenAlexW2949141046

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.