Evidence map›Paper›PMID 27374332›Full record

ArticleCell2016

Nfib Promotes Metastasis through a Widespread Increase in Chromatin Accessibility.

Sarah K Denny, Dian Yang, Chen-Hua Chuang, Jennifer J Brady, Jing Shan Lim, Barbara M Grüner, Shin-Heng Chiou, Alicia N Schep, Jessika Baral, Cécile Hamard and 8 more

Open access · bronzeAbstract read
In one paragraph

Article in Cell, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 248 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
248citing papers in PubMed, 1 pooled it
22.1field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

248 citing papers in PubMed, 1 synthesis or guideline pooled it, 391 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. FFPE-CUTAC: A Single Assay, Multiple Layers.bioRxiv : the preprint server for biology · 2026
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  7. Molecular mechanisms and therapeutic targets in lung cancer-nerve crosstalk.Chinese medical journal pulmonary and critical care medicine · 2026
    Review
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Nuclear Factor I-B Delays Liver Fibrosis by Inhibiting Chemokine Ligand 5 Transcription.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026
    Article
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Review

188 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

18 authors at 3 institutions in 2 countries.

Sarah K DennyBiophysics Program, Stanford University School of Medicine, Stanford, CA 94305, USA.
Dian YangCancer Biology Program, Stanford University School of Medicine, Stanford, CA 94305, USA.
Chen-Hua ChuangDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA.
Jennifer J BradyDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA.
Jing Shan LimCancer Biology Program, Stanford University School of Medicine, Stanford, CA 94305, USA.
Barbara M GrünerDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA.
Shin-Heng ChiouDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA.
Alicia N SchepDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA.
Jessika BaralDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA.
Cécile HamardService de Pneumologie, Hôpital Tenon-APHP, Université Paris 6 Pierre et Marie Curie, 75020 Paris, France.
Martine AntoineService de Pneumologie, Hôpital Tenon-APHP, Université Paris 6 Pierre et Marie Curie, 75020 Paris, France.
Marie WislezService de Pneumologie, Hôpital Tenon-APHP, Université Paris 6 Pierre et Marie Curie, 75020 Paris, France.
Christina S KongDepartment of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Andrew J ConnollyDepartment of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA.
Kwon-Sik ParkDepartment of Microbiology, Immunology, and Cancer Biology, University of Virginia School of Medicine, Charlottesville, VA 22908, USA.
Julien SageCancer Biology Program, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA; Stanford Cancer Institute, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Pediatrics, Stanford University School of Medicine, Stanford, CA 94305, USA.
William J GreenleafBiophysics Program, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Applied Physics, Stanford University, Stanford, CA 94305, USA. Electronic address: wjg@stanford.edu.
Monte M WinslowCancer Biology Program, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA; Department of Pathology, Stanford University School of Medicine, Stanford, CA 94305, USA; Stanford Cancer Institute, Stanford University School of Medicine, Stanford, CA 94305, USA. Electronic address: mwinslow@stanford.edu.
Stanford University · USSorbonne Université · FRUniversity of Virginia · US

Funding

Translational Oncology Research Program (Project-005)P30CA124435 · NCI · STANFORD UNIVERSITY · PI Melinda L. Telli · 2007 to 2026
$71.4M
Special EquipmentP50HG007735 · NHGRI · STANFORD UNIVERSITY · PI CHANG, HOWARD Y · 2014 to 2018
$15.2M
Molecular Biophysics Training Program at StanfordT32GM008294 · NIGMS · STANFORD UNIVERSITY · PI HUANG, KERWYN C. · 1989 to 2019
$7.4M
Molecular and cellular mechanisms of SCLC metastasisR01CA206540 · NCI · STANFORD UNIVERSITY · PI SAGE, JULIEN · 2016 to 2019
$1.7M
Mechanisms governing tumor differentiation and metastasisF32CA189659 · NCI · STANFORD UNIVERSITY · PI BRADY, JENNIFER · 2014 to 2015
$106k
NCI NIH HHS F32 CA189659NCI NIH HHS P30 CA124435NCI NIH HHS R01 CA206540NHGRI NIH HHS P50 HG007735NIGMS NIH HHS T32 GM008294
6 · The paper itself

Abstract

Metastases are the main cause of cancer deaths, but the mechanisms underlying metastatic progression remain poorly understood. We isolated pure populations of cancer cells from primary tumors and metastases from a genetically engineered mouse model of human small cell lung cancer (SCLC) to investigate the mechanisms that drive the metastatic spread of this lethal cancer. Genome-wide characterization of chromatin accessibility revealed the opening of large numbers of distal regulatory elements across the genome during metastatic progression. These changes correlate with copy number amplification of the Nfib locus, and differentially accessible sites were highly enriched for Nfib transcription factor binding sites. Nfib is necessary and sufficient to increase chromatin accessibility at a large subset of the intergenic regions. Nfib promotes pro-metastatic neuronal gene expression programs and drives the metastatic ability of SCLC cells. The identification of widespread chromatin changes during SCLC progression reveals an unexpected global reprogramming during metastatic progression.

Indexed as

Amino Acid MotifsAnimalsCell Line, TumorCells, CulturedDisease Models, AnimalGene Expression Regulation, NeoplasticGene Knockdown TechniquesHumansLung NeoplasmsMiceNeoplasm MetastasisNFI Transcription FactorsPromoter Regions, GeneticSmall Cell Lung CarcinomaUp-RegulationNfib protein, mouseNFI Transcription Factors

Identifiers

PMID27374332
PMCPMC5004630
OpenAlexW2461903592

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.