Evidence map›Paper›PMID 27374009›Full record

ArticleScientific reports2016

Molecular characterization and analysis of high-level multidrug-resistance of Shigella flexneri serotype 4s strains from China.

Chaojie Yang, Peng Li, Xiujuan Zhang, Qiuxia Ma, Xianyan Cui, Hao Li, Hongbo Liu, Jian Wang, Jing Xie, Fuli Wu and 12 more

Abstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 2 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 2 syntheses or guidelines pooled it.

  1. Pooled it
  2. The increasing antimicrobial resistance ofPathogens and global health · 2023
    Pooled it
  3. Article
  4. Review
  5. Oman medical journal · 2023
    Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Shigella flexneri: an emerging pathogen.Folia microbiologica · 2020
    Review
  12. Article
  13. Two novel mutations inAnnals of translational medicine · 2018
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Newest data on fluoroquinolone resistance mechanism ofAntimicrobial resistance and infection control · 2017
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

22 authors.

Chaojie YangInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Peng LiInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Xiujuan ZhangBeijing Chaoyang Hospital, Capital Medical University, Beijing 100043, China.
Qiuxia MaInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Xianyan CuiInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Hao LiInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Hongbo LiuInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Jian WangInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Jing XieInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Fuli WuInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Chunyu ShengInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Xinying DuInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Lihua QiInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Wenli SuInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Leili JiaInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Xuebin XuShanghai Municipal Centre for Disease Control and Prevention, Shanghai 200336, China.
Jiayong ZhaoHenan Provincial Centre for Disease Control and Prevention, Zhengzhou 450016, China.
Shengli XiaHenan Provincial Centre for Disease Control and Prevention, Zhengzhou 450016, China.
Na ZhouHealth Bureau, Logistics Support Department of Central Military Commission, Chinese PLA, Beijing 100038, China.
Hui MaHealth Bureau, Logistics Support Department of Central Military Commission, Chinese PLA, Beijing 100038, China.
Shaofu QiuInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.
Hongbin SongInstitute of Disease Control and Prevention, Academy of Military Medical Sciences, Beijing 100071, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

To conduct the first comprehensive analysis of Shigella flexneri serotype 4s, a novel serotype found in 2010, we identified 24 serotype 4s isolates from 1973 shigellosis cases in China (2002-2014). The isolates were characterized by single nucleotide polymorphism (SNP) phylogenetic analysis, pulsed-field gel electrophoresis (PFGE) and multilocus sequence typing (MLST) to determine their genetic relatedness, and analysed further for their antimicrobial susceptibilities and antimicrobial resistance determinants. The PFGE and SNP phylogenetic analyses suggest that S. flexneri serotype 4s strains are derived from multiple serotypes, including two predominant serotypes in China: serotype X variant and serotype II. Three new sequence types were identified by MLST. All isolates were resistant to ticarcillin, ampicillin and tetracycline, with high-level resistance to third-generation cephalosporins. Notably, all the isolates were multidrug resistant (MDR), with the highest levels of resistance observed for eight antimicrobials classes. Most isolates contain various antimicrobial resistance determinants. In conclusion, we found that serotype 4s isolates have multiple evolutionary sources, diverse biochemical characteristics and genomes, and highly prevalent multidrug resistance and antimicrobial-resistant determinants. With few clinical treatment options, continuous monitoring and timely intervention against this emerging MDR serotype is essential. The possibility that serotype 4s will become the next predominant serotype exists.

Indexed as

Drug Resistance, Multiple, BacterialSerogroupAnti-Bacterial AgentsChinaElectrophoresis, Gel, Pulsed-FieldHumansIntegronsMultilocus Sequence TypingPhylogenyShigella flexneriAnti-Bacterial Agents

Identifiers

PMID27374009
PMCPMC4931504

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.