Evidence map›Paper›PMID 27373144›Full record

ArticleDNA repair2016

Common and unique genetic interactions of the poly(ADP-ribose) polymerases PARP1 and PARP2 with DNA double-strand break repair pathways.

Rajib Ghosh, Sanchita Roy, Johan Kamyab, Francoise Danzter, Sonia Franco

Open access · greenAbstract read
In one paragraph

Article in DNA repair, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.3field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 27 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 2 countries.

Rajib Ghosh *Department of Radiation Oncology and Molecular Radiation Sciences; Johns Hopkins School of Medicine, Baltimore, MD 21287, United States.
Sanchita Roy *Department of Radiation Oncology and Molecular Radiation Sciences; Johns Hopkins School of Medicine, Baltimore, MD 21287, United States.
Johan KamyabDepartment of Radiation Oncology and Molecular Radiation Sciences; Johns Hopkins School of Medicine, Baltimore, MD 21287, United States.
Francoise DanzterBiotechnology and Cell Signaling Unit, University of Strasbourg, 67412 Illkirch, France.
Sonia FrancoDepartment of Radiation Oncology and Molecular Radiation Sciences; Johns Hopkins School of Medicine, Baltimore, MD 21287, United States.
Johns Hopkins University · USBiotechnologie et Signalisation Cellulaire · FR

Funding

Molecular determinants of PARP inhibitor sensitivity in 11q-deleted malignancyR21CA181417 · NCI · JOHNS HOPKINS UNIVERSITY · PI FRANCO, SONIA · 2015 to 2016
$404k
NCI NIH HHS R21 CA181417
6 · The paper itself

Abstract

In mammalian cells, chromatin poly(ADP-ribos)ylation (PARylation) at sites of DNA Double-Strand Breaks (DSBs) is mediated by two highly related enzymes, PARP1 and PARP2. However, enzyme-specific genetic interactions with other DSB repair factors remain largely undefined. In this context, it was previously shown that mice lacking PARP1 and H2AX, a histone variant that promotes DSB repair throughout the cell cycle, or the core nonhomologous end-joining (NHEJ) factor Ku80 are not viable, while mice lacking PARP1 and the noncore NHEJ factor DNA-PKcs are severely growth retarded and markedly lymphoma-prone. Here, we have examined the requirement for PARP2 in these backgrounds. We find that, like PARP1, PARP2 is essential for viability in mice lacking H2AX. Moreover, treatment of H2AX-deficient primary fibroblasts or B lymphocytes with PARP inhibitors leads to activation of the G2/M checkpoint and accumulation of chromatid-type breaks in a lineage- and gene-dose dependent manner. In marked contrast to PARP1, loss of PARP2 does not result in additional phenotypes in growth, development or tumorigenesis in mice lacking either Ku80 or DNA-PKcs. Altogether these findings highlight specific nonoverlapping functions of PARP1 and PARP2 at H2AX-deficient chromatin during replicative phases of the cell cycle and uncover a unique requirement for PARP1 in NHEJ-deficient cells.

Indexed as

DNA End-Joining RepairAnimalsBenzimidazolesB-LymphocytesCarcinogenesisChromatinDNADNA-Activated Protein KinaseDNA-Binding ProteinsDNA Breaks, Double-StrandedEmbryo, MammalianFibroblastsG2 Phase Cell Cycle CheckpointsHistonesHumansKu AutoantigenBenzimidazolesChromatinDNADNA-Activated Protein KinaseDNA-Binding Proteinsgamma-H2AX protein, mouseHistonesKu AutoantigenNuclear ProteinsolaparibParp1 protein, mouseParp2 protein, mousePhthalazinesPiperazinesPoly (ADP-Ribose) Polymerase-1Poly(ADP-ribose) Polymerase InhibitorsPoly(ADP-ribose) PolymerasesPrkdc protein, mouseveliparibXrcc5 protein, mouseDNA-PKcsDouble-strand breaksH2AXKu80PARP1PARP2

Identifiers

PMID27373144
PMCPMC4979568
OpenAlexW2444594224

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.