Evidence map›Paper›PMID 27372748›Full record

ArticleMethods in enzymology2016

Preparation, Crystallization, and Structure Determination of Chromatin Enzyme/Nucleosome Complexes.

R K McGinty, R D Makde, S Tan

Open access · greenAbstract read
In one paragraph

Article in Methods in enzymology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
3.8field-weighted citation impact, top 7% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 17 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

R K McGintyCenter for Eukaryotic Gene Regulation, The Pennsylvania State University, University Park, PA, United States.
R D MakdeCenter for Eukaryotic Gene Regulation, The Pennsylvania State University, University Park, PA, United States.
S TanCenter for Eukaryotic Gene Regulation, The Pennsylvania State University, University Park, PA, United States. Electronic address: sxt30@psu.edu.
Pennsylvania State University · US

Funding

Structural Basis for RCC1 Directed Recruitment of Ran GTPase to ChromatinR01GM088236 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI TAN, SONG · 2009 to 2017
$2.5M
Molecular interactions of histone ubiquitylation enzymes with the nucleosomeR01GM111651 · NIGMS · PENNSYLVANIA STATE UNIVERSITY, THE · PI TAN, SONG · 2014 to 2017
$1.1M
Damon Runyon Cancer Research Foundation DRG-2107-12NIGMS NIH HHS R01 GM088236NIGMS NIH HHS R01 GM111651
6 · The paper itself

Abstract

Structural studies of chromatin complexes composed of chromatin factors or enzymes bound to the nucleosome have been constrained by the ability to produce high-quality complexes in the amounts appropriate for biophysical studies and by the difficulty of crystallizing these complexes. We describe here procedures and approaches to prepare chromatin complexes, to crystallize chromatin complexes, and to improve diffraction properties through postcrystallization soaks. Special attention is paid to evaluating the quality of the purified chromatin complexes as well as assessing the presence of the chromatin protein or enzyme in crystals. The methods described for preparing and purifying chromatin complexes should be applicable to biochemical, biophysical, and other structural approaches including cryoelectron microscopy.

Indexed as

AnimalsChromatinChromatography, GelCrystallizationDNAFluorescent DyesHumansNucleosomesChromatinDNAFluorescent DyesNucleosomesChromatin enzymesCrystal dehydrationFluorescent labelingMacromolecular crystallizationNucleosome core particlePostcrystallization soaksProtein–DNA complexSize-exclusion chromatography

Identifiers

PMID27372748
PMCPMC5505557
OpenAlexW2480109535

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.