Evidence map›Paper›PMID 27372243›Full record

ArticlePlant physiology2016

Oxygen Sensing via the Ethylene Response Transcription Factor RAP2.12 Affects Plant Metabolism and Performance under Both Normoxia and Hypoxia.

Melanie Verena Paul, Srignanakshi Iyer, Carmen Amerhauser, Martin Lehmann, Joost T van Dongen, Peter Geigenberger

Open access · greenAbstract read
In one paragraph

Article in Plant physiology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
25.4field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 108 citations in OpenAlex.

  1. Review
  2. Plastid-to-nucleus communication under hypoxia involves group VII ethylene response factors inProceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  3. Article
  4. Article
  5. Review
  6. Review
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  8. Review
  9. Review
  10. Article
  11. Article
  12. Phosphatidic acid signaling and function in nuclei.Progress in lipid research · 2024
    Review
  13. Plant Life with and without Oxygen: A Metabolomics Approach.International journal of molecular sciences · 2023
    Review
  14. Article
  15. Article
  16. Review
  17. Article
  18. Article
  19. Comparative Seeds Storage Transcriptome Analysis ofInternational journal of molecular sciences · 2022
    Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Melanie Verena PaulLudwig-Maximilians-Universität München, Department Biologie I, 82152 Martinsried, Germany (M.V.P., S.I., C.A., M.L., P.G.); andInstitute of Biology I, RWTH Aachen University, 52074 Aachen, Germany (J.T.v.D.).
Srignanakshi IyerLudwig-Maximilians-Universität München, Department Biologie I, 82152 Martinsried, Germany (M.V.P., S.I., C.A., M.L., P.G.); andInstitute of Biology I, RWTH Aachen University, 52074 Aachen, Germany (J.T.v.D.).
Carmen AmerhauserLudwig-Maximilians-Universität München, Department Biologie I, 82152 Martinsried, Germany (M.V.P., S.I., C.A., M.L., P.G.); andInstitute of Biology I, RWTH Aachen University, 52074 Aachen, Germany (J.T.v.D.).ORCID 0000-0002-8789-1103
Martin LehmannLudwig-Maximilians-Universität München, Department Biologie I, 82152 Martinsried, Germany (M.V.P., S.I., C.A., M.L., P.G.); andInstitute of Biology I, RWTH Aachen University, 52074 Aachen, Germany (J.T.v.D.).
Joost T van DongenLudwig-Maximilians-Universität München, Department Biologie I, 82152 Martinsried, Germany (M.V.P., S.I., C.A., M.L., P.G.); andInstitute of Biology I, RWTH Aachen University, 52074 Aachen, Germany (J.T.v.D.).ORCID 0000-0001-7944-9289
Peter GeigenbergerLudwig-Maximilians-Universität München, Department Biologie I, 82152 Martinsried, Germany (M.V.P., S.I., C.A., M.L., P.G.); andInstitute of Biology I, RWTH Aachen University, 52074 Aachen, Germany (J.T.v.D.) geigenberger@bio.lmu.de.ORCID 0000-0001-9512-349X
Ludwig-Maximilians-Universität München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Subgroup-VII-ethylene-response-factor (ERF-VII) transcription factors are involved in the regulation of hypoxic gene expression and regulated by proteasome-mediated proteolysis via the oxygen-dependent branch of the N-end-rule pathway. While research into ERF-VII mainly focused on their role to regulate anoxic gene expression, little is known on the impact of this oxygen-sensing system in regulating plant metabolism and growth. By comparing Arabidopsis (Arabidopsis thaliana) plants overexpressing N-end-rule-sensitive and insensitive forms of the ERF-VII-factor RAP2.12, we provide evidence that oxygen-dependent RAP2.12 stability regulates central metabolic processes to sustain growth, development, and anoxic resistance of plants. (1) Under normoxia, overexpression of N-end-rule-insensitive Δ13RAP2.12 led to increased activities of fermentative enzymes and increased accumulation of fermentation products, which were accompanied by decreased adenylate energy states and starch levels, and impaired plant growth and development, indicating a role of oxygen-regulated RAP2.12 degradation to prevent aerobic fermentation. (2) In Δ13RAP2.12-overexpressing plants, decreased carbohydrate reserves also led to a decrease in anoxic resistance, which was prevented by external Suc supply. (3) Overexpression of Δ13RAP2.12 led to decreased respiration rates, changes in the levels of tricarboxylic acid cycle intermediates, and accumulation of a large number of amino acids, including Ala and γ-amino butyric acid, indicating a role of oxygen-regulated RAP2.12 abundance in controlling the flux-modus of the tricarboxylic acid cycle. (4) The increase in amino acids was accompanied by increased levels of immune-regulatory metabolites. These results show that oxygen-sensing, mediating RAP2.12 degradation is indispensable to optimize metabolic performance, plant growth, and development under both normoxic and hypoxic conditions.

Indexed as

MetabolomeAerobiosisAmino AcidsAnaerobiosisArabidopsisArabidopsis ProteinsBiomassCitric Acid CycleDNA-Binding ProteinsEthylenesFermentationGas Chromatography-Mass SpectrometryGene Expression Regulation, PlantMetabolomicsMutationOxygenAmino AcidsArabidopsis ProteinsDNA-Binding ProteinsethyleneEthylenesOxygenRAP2.12 protein, ArabidopsisSucroseTranscription Factors

Identifiers

PMID27372243
PMCPMC5074624
OpenAlexW2508994555

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.