Evidence map›Paper›PMID 27369378›Full record

ArticleNucleic acids research2016

Structure and mechanism of a molecular rheostat, an RNA thermometer that modulates immune evasion by Neisseria meningitidis.

Ravi Pratap Barnwal, Edmund Loh, Katherine S Godin, Jordan Yip, Hayley Lavender, Christoph M Tang, Gabriele Varani

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
3.3field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 42 citations in OpenAlex.

  1. Localized ribosome access and distal tuning via thebioRxiv : the preprint server for biology · 2026
    Article
  2. Article
  3. Application of NMR to Large RNAs.Journal of molecular biology · 2025
    Review
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Article
  10. Multilayer Regulation ofMicroorganisms · 2022
    Article
  11. Article
  12. Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Probing RNA structure in vivo.Current opinion in structural biology · 2019
    Review
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Ravi Pratap BarnwalDepartment of Chemistry, University of Washington, Seattle, WA 98195, USA.
Edmund LohSir William Dunn School of Pathology, University of Oxford, South Parks Road, Oxford OX1 3RE, UK.ORCID http://orcid.org/0000-0001-7050-566X
Katherine S GodinDepartment of Chemistry, University of Washington, Seattle, WA 98195, USA.
Jordan YipDepartment of Chemistry, University of Washington, Seattle, WA 98195, USA.
Hayley LavenderSir William Dunn School of Pathology, University of Oxford, South Parks Road, Oxford OX1 3RE, UK.
Christoph M TangSir William Dunn School of Pathology, University of Oxford, South Parks Road, Oxford OX1 3RE, UK christoph.tang@path.ox.ac.uk.ORCID http://orcid.org/0000-0001-8366-3245
Gabriele VaraniDepartment of Chemistry, University of Washington, Seattle, WA 98195, USA varani@chem.washington.edu.
University of Washington · USUniversity of Oxford · GB

Funding

Regulation of microRNA processingR01GM103834 · NIGMS · UNIVERSITY OF WASHINGTON · PI VARANI, GABRIELE · 2014 to 2017
$1.1M
NIGMS NIH HHS R01 GM103834Wellcome Trust 102908/Z/13/Z
6 · The paper itself

Abstract

Neisseria meningitidis causes bacterial meningitis and septicemia. It evades the host complement system by upregulating expression of immune evasion factors in response to changes in temperature. RNA thermometers within mRNAs control expression of bacterial immune evasion factors, including CssA, in the 5'-untranslated region of the operon for capsule biosynthesis. We dissect the molecular mechanisms of thermoregulation and report the structure of the CssA thermometer. We show that the RNA thermometer acts as a rheostat, whose stability is optimized to respond in a small temperature range around 37°C as occur within the upper airways during infection. Small increases in temperature gradually open up the structure to allow progressively increased access to the ribosome binding site. Even small changes in stability induced by mutations of imperfect base pairs, as in naturally occurring polymorphisms, shift the thermometer response outside of the desired temperature range, suggesting that its activity could be modulated by pharmacological intervention.

Indexed as

Gene Expression Regulation, BacterialTemperature5' Untranslated RegionsBacterial CapsulesImmune EvasionMagnetic Resonance SpectroscopyMeningitis, MeningococcalModels, BiologicalMutationNeisseria meningitidisNucleic Acid ConformationPolymorphism, GeneticRNA, BacterialRNA StabilityThermosensing5' Untranslated RegionsRNA, Bacterial

Identifiers

PMID27369378
PMCPMC5100586
OpenAlexW2474821992

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.