Evidence map›Paper›PMID 27368338›Full record

ArticleHuman genetics2016

Identity by descent fine mapping of familial adult myoclonus epilepsy (FAME) to 2p11.2-2q11.2.

Lyndal Henden, Saskia Freytag, Zaid Afawi, Sara Baldassari, Samuel F Berkovic, Francesca Bisulli, Laura Canafoglia, Giorgio Casari, Douglas Ewan Crompton, Christel Depienne and 19 more

Abstract read
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In one paragraph

Article in Human genetics, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
3.3field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 35 citations in OpenAlex.

  1. Pooled it
  2. Repeat Expansions with Small TTTCA Insertions in MARCHF6 Cause Familial Myoclonus without Epilepsy.Movement disorders : official journal of the Movement Disorder Society · 2025
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

29 authors at 20 institutions in 6 countries.

Lyndal HendenPopulation Health and Immunity Division, The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, 3052, Australia.
Saskia FreytagPopulation Health and Immunity Division, The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, 3052, Australia.
Zaid AfawiTel Aviv University Medical School, 69978, Tel Aviv, Israel.
Sara BaldassariMedical Genetics Unit, Polyclinic Sant'Orsola-Malpighi-Department of Medical and Surgical Sciences, University of Bologna, Bologna, Italy.
Samuel F BerkovicEpilepsy Research Centre, Department of Medicine, University of Melbourne Austin Health, Melbourne, VIC, 3084, Australia.
Francesca BisulliIRCCS Istituto delle Scienze Neurologiche di Bologna, Bologna, Italy.
Laura CanafogliaNeurophysiopathology and Epilepsy Center, IRCCS Foundation C. Besta Neurological Institute, Milan, Italy.
Giorgio CasariDivision of Genetics and Cell Biology, Università Vita-Salute San Raffaele, San Raffaele Scientific Institute, Milan, Italy.
Douglas Ewan CromptonNeurology Department, Northern Health, Melbourne, VIC, 3076, Australia.
Christel DepienneDépartement de Médicine translationnelle et Neurogénétique, IGBMC, CNRS UMR 7104/INSERM U964/Université de Strasbourg, Illkirch, France.
Jozef GeczRobinson Institute and School of Medicine, The University of Adelaide, Adelaide, SA, 5005, Australia.
Renzo GuerriniPediatric Neurology, Neurogenetics and Neurobiology Unit and Laboratories, Neuroscience Department, A Meyer Children's Hospital, University of Florence, Florence, Italy.
Ingo HelbigDepartment of Neuropediatrics, Christian-Albrechts-University of Kiel and University Medical Center, Kiel, Schleswig-Holstein, Germany.
Edouard HirschMedical and Surgical Epilepsy Unit, Hautepierre Hospital, University of Strasbourg, Strasbourg, France.
Boris KerenDépartement de Génétique, Hôpital de la Pitié-Salpêtrière, Assistance Publique-Hôpitaux de Paris, 75013, Paris, France.
Karl Martin KleinDepartment of Neurology, Epilepsy Center Frankfurt Rhine-Main, Center of Neurology and Neurosurgery, University Hospital, Goethe-University Frankfurt, Frankfurt, Germany.
Pierre LabaugeDepartment of Neurology, Montpellier University, Gui de Chauliac, 34295, Montpellier, Cedex 5, France.
Eric LeGuernSorbonne Universités, UPMC Univ Paris 06,UMR S 1127, ICM, 75013, Paris, France.
Laura LicchettaIRCCS Istituto delle Scienze Neurologiche di Bologna, Bologna, Italy.
Davide MeiPediatric Neurology, Neurogenetics and Neurobiology Unit and Laboratories, Neuroscience Department, A Meyer Children's Hospital, University of Florence, Florence, Italy.
Caroline NavaDépartement de Génétique, Hôpital de la Pitié-Salpêtrière, Assistance Publique-Hôpitaux de Paris, 75013, Paris, France.
Tommaso PippucciMedical Genetics Unit, Polyclinic Sant'Orsola-Malpighi-Department of Medical and Surgical Sciences, University of Bologna, Bologna, Italy.
Gabrielle RudolfDépartement de Médicine translationnelle et Neurogénétique, IGBMC, CNRS UMR 7104/INSERM U964/Université de Strasbourg, Illkirch, France.
Ingrid Eileen SchefferEpilepsy Research Centre, Department of Medicine, University of Melbourne Austin Health, Melbourne, VIC, 3084, Australia.
Pasquale StrianoPediatric Neurology and Muscular Diseases Unit, Department of Neurosciences, Rehabilitation, Ophthalmology, Genetics, Maternal and Child Health, Gaslini Institute, Genoa, Italy.
Paolo TinuperIRCCS Istituto delle Scienze Neurologiche di Bologna, Bologna, Italy.
Federico ZaraLaboratory of Neurogenetics, Department of Neurosciences, Gaslini Institute, Genoa, Italy.
Mark CorbettRobinson Institute and School of Medicine, The University of Adelaide, Adelaide, SA, 5005, Australia.
Melanie BahloPopulation Health and Immunity Division, The Walter and Eliza Hall Institute of Medical Research, Melbourne, VIC, 3052, Australia. bahlo@wehi.edu.au.
University of Melbourne · AUIstituto Giannina Gaslini · ITMeyer Children's Hospital · ITPoliclinico S.Orsola-Malpighi · ITUniversity of Adelaide · AUAssistance Publique – Hôpitaux de Paris · FRCentre National de la Recherche Scientifique · FRFondazione IRCCS Istituto Neurologico Carlo Besta · ITHôpital Gui de Chauliac · FRInserm · FRIstituti di Ricovero e Cura a Carattere Scientifico · ITIstituto delle Scienze Neurologiche di Bologna · ITKiel University · DENorthern Health · AUPitié-Salpêtrière Hospital · FRSorbonne Université · FRTel Aviv University · ILUniversitätsklinikum Gießen und Marburg · DEUniversité de Strasbourg · FRUniversity of Bologna · IT

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Familial adult myoclonus epilepsy (FAME) is a rare autosomal dominant disorder characterized by adult onset, involuntary muscle jerks, cortical myoclonus and occasional seizures. FAME is genetically heterogeneous with more than 70 families reported worldwide and five potential disease loci. The efforts to identify potential causal variants have been unsuccessful in all but three families. To date, linkage analysis has been the main approach to find and narrow FAME critical regions. We propose an alternative method, pedigree free identity-by-descent (IBD) mapping, that infers regions of the genome between individuals that have been inherited from a common ancestor. IBD mapping provides an alternative to linkage analysis in the presence of allelic and locus heterogeneity by detecting clusters of individuals who share a common allele. Succeeding IBD mapping, gene prioritization based on gene co-expression analysis can be used to identify the most promising candidate genes. We performed an IBD analysis using high-density single nucleotide polymorphism (SNP) array data followed by gene prioritization on a FAME cohort of ten European families and one Australian/New Zealander family; eight of which had known disease loci. By identifying IBD regions common to multiple families, we were able to narrow the FAME2 locus to a 9.78 megabase interval within 2p11.2-q11.2. We provide additional evidence of a founder effect in four Italian families and allelic heterogeneity with at least four distinct founders responsible for FAME at the FAME2 locus. In addition, we suggest candidate disease genes using gene prioritization based on gene co-expression analysis.

Indexed as

Genetic HeterogeneityAllelesChromosome MappingChromosomes, Human, Pair 2Epilepsies, MyoclonicFemaleFounder EffectGenetic LinkageGenotypeHumansMaleMuscle, SmoothPedigreePolymorphism, Single NucleotideSeizures

Identifiers

PMID27368338
OpenAlexW2467366180

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.