Evidence map›Paper›PMID 27366766›Full record

ArticleVirusdisease2016

Molecular characterization of banana bunchy top virus isolate from Sri Lanka and its genetic relationship with other isolates.

W A R T Wickramaarachchi, K S Shankarappa, K T Rangaswamy, M N Maruthi, R G A S Rajapakse, Saptarshi Ghosh

Open access · greenAbstract read
In one paragraph

Article in Virusdisease, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.7field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 20 citations in OpenAlex.

  1. A sensitive batch detection ofVirusdisease · 2024
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 3 countries.

W A R T WickramaarachchiDivision of Plant Pathology, Department of Agriculture, Horticulture Crops Research and Development Institute, Gannoruwa, Peradeniya, 20400 Sri Lanka.
K S ShankarappaDepartment of Plant Pathology, K. R. C. College of Horticulture, Arabhavi, University of Horticultural Sciences, Bagalkot, Karnataka India.ORCID 0000-0003-4894-0280
K T RangaswamyDepartment of Plant Pathology, University of Agricultural Sciences, GKVK, Bengaluru, 560 065 India.
M N MaruthiNatural Resources Institute, University of Greenwich, Central Avenue, Chatham Maritime, Kent, ME4 4TB UK.
R G A S RajapakseDivision of Plant Pathology, Department of Agriculture, Horticulture Crops Research and Development Institute, Gannoruwa, Peradeniya, 20400 Sri Lanka.
Saptarshi GhoshNatural Resources Institute, University of Greenwich, Central Avenue, Chatham Maritime, Kent, ME4 4TB UK.
Natural Resources Institute · GBVeterinary Research Institute · LKUniversity of Agricultural Sciences, Bangalore · INUniversity of Horticultural Sciences Bagalkote · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Bunchy top disease of banana caused by Banana bunchy top virus (BBTV, genus Babuvirus family Nanoviridae) is one of the most important constraints in production of banana in the different parts of the world. Six genomic DNA components of BBTV isolate from Kandy, Sri Lanka (BBTV-K) were amplified by polymerase chain reaction (PCR) with specific primers using total DNA extracted from banana tissues showing typical symptoms of bunchy top disease. The amplicons were of expected size of 1.0-1.1 kb, which were cloned and sequenced. Analysis of sequence data revealed the presence of six DNA components; DNA-R, DNA-U3, DNA-S, DNA-N, DNA-M and DNA-C for Sri Lanka isolate. Comparisons of sequence data of DNA components followed by the phylogenetic analysis, grouped Sri Lanka-(Kandy) isolate in the Pacific Indian Oceans (PIO) group. Sri Lanka-(Kandy) isolate of BBTV is classified a new member of PIO group based on analysis of six components of the virus.

Indexed as

BananaBBTVPhylogenetic treePolymerase chain reactionSequenceSri Lanka

Identifiers

PMID27366766
PMCPMC4908997
OpenAlexW2341442181

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.