Evidence map›Paper›PMID 27365347›Full record

ArticleGenome announcements2016

Genome Sequences of Gordonia terrae Phages Attis and SoilAssassin.

Welkin H Pope, Daniel N Biery, Zachary T Huff, Amy B Huynh, William M McFadden, Julia S Mouat, Scott E Schneiderman, Hannah Song, Leah E Szpak, Melanie S Umbaugh and 15 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Genome announcements, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Bacteriophages ofmBio · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors.

Welkin H PopeDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA welkin@pitt.edu.
Daniel N BieryDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Zachary T HuffDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Amy B HuynhDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
William M McFaddenDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Julia S MouatDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Scott E SchneidermanDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Hannah SongDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Leah E SzpakDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Melanie S UmbaughDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Brian A GermanDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Jill E McDonnellDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Nadia MezghaniDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Claire E SchaferDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Paige K ThompsonDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Megan C UlbrichDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Victor J YuDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Emily C FurbeeDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Sarah R GrubbDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Marcie H WarnerDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Matthew T MontgomeryDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Rebecca A GarlenaDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Daniel A RussellDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Deborah Jacobs-SeraDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.
Graham F HatfullDepartment of Biological Sciences, University of Pittsburgh, Pittsburgh, Pennsylvania, USA.

Funding

Dynamics of viral host range evolutionR01GM116884 · NIGMS · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI HATFULL, GRAHAM F. · 2015 to 2019
$2.0M
NIGMS NIH HHS R01 GM116884
6 · The paper itself

Abstract

Attis and SoilAssassin are two closely related bacteriophages isolated on Gordonia terrae 3612 from separate soil samples in Pittsburgh, PA. The Attis and SoilAssassin genomes are 47,881 bp and 47,880 bp, respectively, and have 74 predicted protein-coding genes, including toxin-antitoxin systems, but no tRNAs.

Identifiers

PMID27365347
PMCPMC4929510

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.