Evidence map›Paper›PMID 27365124›Full record

ArticleMicrobial biotechnology2016

Multiple Locus Variable number of tandem repeat Analysis: A molecular genotyping tool for Paenibacillus larvae.

Tine Descamps, Lina De Smet, Pieter Stragier, Paul De Vos, Dirk C de Graaf

Abstract read
In one paragraph

Article in Microbial biotechnology, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Molecular diversity ofFrontiers in veterinary science · 2022
    Article
  5. Article
  6. ERIC and WGS Typing ofInsects · 2021
    Article
  7. Article
  8. Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Tine DescampsLaboratory of Molecular Entomology and Bee Pathology, Faculty of Sciences, Ghent University, Ghent, Belgium. tine.descamps@ugent.be.
Lina De SmetLaboratory of Molecular Entomology and Bee Pathology, Faculty of Sciences, Ghent University, Ghent, Belgium.
Pieter StragierLaboratory of Microbiology, Faculty of Sciences, Ghent University, Ghent, Belgium.
Paul De VosLaboratory of Microbiology, Faculty of Sciences, Ghent University, Ghent, Belgium.
Dirk C de GraafLaboratory of Molecular Entomology and Bee Pathology, Faculty of Sciences, Ghent University, Ghent, Belgium.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

American Foulbrood, caused by Paenibacillus larvae, is the most severe bacterial disease of honey bees (Apis mellifera). To perform genotyping of P. larvae in an epidemiological context, there is a need of a fast and cheap method with a high resolution. Here, we propose Multiple Locus Variable number of tandem repeat Analysis (MLVA). MLVA has been used for typing a collection of 209 P. larvae strains from which 23 different MLVA types could be identified. Moreover, the developed methodology not only permits the identification of the four Enterobacterial Repetitive Intergenic Consensus (ERIC) genotypes, but allows also a discriminatory subdivision of the most dominant ERIC type I and ERIC type II genotypes. A biogeographical study has been conducted showing a significant correlation between MLVA genotype and the geographical region where it was isolated.

Indexed as

Minisatellite RepeatsGenotyping TechniquesMolecular TypingPaenibacillus larvaePhylogeography

Identifiers

PMID27365124
PMCPMC5072193

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.