Evidence map›Paper›PMID 27364497›Full record

ArticleMicrobiome2016

Nasopharyngeal microbiota composition of children is related to the frequency of upper respiratory infection and acute sinusitis.

Clark A Santee, Nabeetha A Nagalingam, Ali A Faruqi, Gregory P DeMuri, James E Gern, Ellen R Wald, Susan V Lynch

Abstract read
In one paragraph

Article in Microbiome, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed.

  1. Article
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  5. Big lessons from the littleFrontiers in immunology · 2025
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  10. Differences in the effects ofFrontiers in pediatrics · 2023
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  11. Article
  12. Article
  13. The microbiome of the nasopharynx.Journal of medical microbiology · 2021
    Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Clark A SanteeDivision of Gastroenterology, Department of Medicine, University of California San Francisco, San Francisco, CA, 94143, USA.
Nabeetha A NagalingamDivision of Gastroenterology, Department of Medicine, University of California San Francisco, San Francisco, CA, 94143, USA.
Ali A FaruqiDivision of Gastroenterology, Department of Medicine, University of California San Francisco, San Francisco, CA, 94143, USA.
Gregory P DeMuriDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, WI, 53792, USA.
James E GernDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, WI, 53792, USA.
Ellen R WaldDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, WI, 53792, USA.
Susan V LynchDivision of Gastroenterology, Department of Medicine, University of California San Francisco, San Francisco, CA, 94143, USA. susan.lynch@ucsf.edu.

Funding

Sinusitis in Children and the Nasopharyngeal MicrobiomeR01AI097172 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI WALD, ELLEN · 2012 to 2016
$3.6M
NIAID NIH HHS R01 AI097172
6 · The paper itself

Abstract

backgroundUpper respiratory infections (URI) and their complications are a major healthcare burden for pediatric populations. Although the microbiology of the nasopharynx is an important determinant of the complications of URI, little is known of the nasopharyngeal (NP) microbiota of children, the factors that affect its composition, and its precise relationship with URI.

resultsHealthy children (n = 47) aged 49-84 months from a prospective cohort study based in Wisconsin, USA, were examined. Demographic and clinical data and NP swab samples were obtained from participants upon entry to the study. All NP samples were profiled for bacterial microbiota using a phylogenetic microarray, and these data were related to demographic characteristics and upper respiratory health outcomes. The composition of the NP bacterial community of children was significantly related prior to the history of acute sinusitis (R (2) = 0.070, P < 0.009). History of acute sinusitis was associated with significant depletion in relative abundance of taxa including Faecalibacterium prausnitzii and Akkermansia spp. and enrichment of Moraxella nonliquefaciens. Enrichment of M. nonliquefaciens was also a characteristic of baseline NP samples of children who subsequently developed acute sinusitis over the 1-year study period. Time to develop URI was significantly positively correlated with NP diversity, and children who experienced more frequent URIs exhibited significantly diminished NP microbiota diversity (P ≤ 0.05).

conclusionsThese preliminary data suggest that previous history of acute sinusitis influences the composition of the NP microbiota, characterized by a depletion in relative abundance of specific taxa. Diminished diversity was associated with more frequent URIs.

Indexed as

BacteriaChildChild, PreschoolCohort StudiesHumansLongitudinal StudiesMicrobiotaNasopharynxOligonucleotide Array Sequence AnalysisPhylogenyProspective StudiesSinusitisVirusesWisconsinAcute sinusitisChildrenMicrobiotaPediatricsUpper respiratory infectionURI

Identifiers

PMID27364497
PMCPMC4929776

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.