Evidence map›Paper›PMID 27364479›Full record

ArticleScientific reports2016

Negative regulation and developmental competence in Aspergillus.

Mi-Kyung Lee, Nak-Jung Kwon, Im-Soon Lee, Seunho Jung, Sun-Chang Kim, Jae-Hyuk Yu

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 57 papers.

0numbers the graph read from it
0cells of the map it votes in
57citing papers in PubMed
6.4field-weighted citation impact, top 3% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

57 citing papers in PubMed, 113 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 2 countries.

Mi-Kyung LeeDepartment of Bacteriology, The University of Wisconsin-Madison, Madison, Wisconsin 53706, USA.
Nak-Jung KwonDepartment of Bacteriology, The University of Wisconsin-Madison, Madison, Wisconsin 53706, USA.
Im-Soon LeeDepartment of Biological Sciences and Center for Biotechnology Research, Institute for Ubiquitous Information Technology and Applications (UBITA), Konkuk University, Seoul 143-701, Republic of Korea.
Seunho JungDepartment of Bioscience and Biotechnology and Center for Biotechnology Research, Institute for Ubiquitous Information Technology and Applications (UBITA), Konkuk University, Seoul 143-701, Republic of Korea.
Sun-Chang KimDepartment of Biological Sciences, Korea Advanced Institute of Science and Technology, Dae-Jeon, Republic of Korea.
Jae-Hyuk YuDepartment of Bacteriology, The University of Wisconsin-Madison, Madison, Wisconsin 53706, USA.
University of Wisconsin–Madison · USKonkuk University · KRKorea Advanced Institute of Science and Technology · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Asexual development (conidiation) in the filamentous fungus Aspergillus nidulans is governed by orchestrated gene expression. The three key negative regulators of conidiation SfgA, VosA, and NsdD act at different control point in the developmental genetic cascade. Here, we have revealed that NsdD is a key repressor affecting the quantity of asexual spores in Aspergillus. Moreover, nullifying both nsdD and vosA results in abundant formation of the development specific structure conidiophores even at 12 h of liquid culture, and near constitutive activation of conidiation, indicating that acquisition of developmental competence involves the removal of negative regulation exerted by both NsdD and VosA. NsdD's role in repressing conidiation is conserved in other aspergilli, as deleting nsdD causes enhanced and precocious activation of conidiation in Aspergillus fumigatus or Aspergillus flavus. In vivo NsdD-DNA interaction analyses identify three NsdD binding regions in the promoter of the essential activator of conidiation brlA, indicating a direct repressive role of NsdD in conidiation. Importantly, loss of flbC or flbD encoding upstream activators of brlA in the absence of nsdD results in delayed activation of brlA, suggesting distinct positive roles of FlbC and FlbD in conidiation. A genetic model depicting regulation of conidiation in A. nidulans is presented.

Indexed as

Gene Expression Regulation, DevelopmentalGene Expression Regulation, FungalAmino Acid SequenceAspergillus fumigatusAspergillus nidulansFungal ProteinsGene DeletionModels, GeneticReproduction, AsexualSequence Homology, Amino AcidSpecies SpecificitySpores, FungalFungal Proteins

Identifiers

PMID27364479
PMCPMC4929475
OpenAlexW2461397435

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.