Evidence map›Paper›PMID 27364007›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2016

Inositol pyrophosphates inhibit synaptotagmin-dependent exocytosis.

Tae-Sun Lee, Joo-Young Lee, Jae Won Kyung, Yoosoo Yang, Seung Ju Park, Seulgi Lee, Igor Pavlovic, Byoungjae Kong, Yong Seok Jho, Henning J Jessen and 5 more

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
3.0field-weighted citation impact, top 10% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 53 citations in OpenAlex.

  1. Article
  2. Review
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  4. Review
  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. Review
  11. Synthesis and biological evaluation of flavonoid-based IP6K2 inhibitors.Journal of enzyme inhibition and medicinal chemistry · 2023
    Article
  12. Review
  13. Article
  14. Article
  15. TNP and its analogs: Modulation of IP6K and CYP3A4 inhibition.Journal of enzyme inhibition and medicinal chemistry · 2022
    Article
  16. Article
  17. Article
  18. Article
  19. 5-IPNature metabolism · 2021
    Article
  20. The Key Role of IPMolecules (Basel, Switzerland) · 2020
    Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors at 9 institutions in 4 countries.

Tae-Sun LeeDepartment of Physics, Korea Advanced Institute of Science and Technology, Daejeon 34141, Korea; Center for Nanomedicine, Institute for Basic Science (IBS), Yonsei University, Seoul 30722, Korea; Yonsei-IBS Institute, Yonsei University, Seoul 30722, Korea;
Joo-Young LeeDepartment of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon 34141, Korea;
Jae Won KyungDepartment of Biomedical Science, Graduate School, Kyung Hee University, Seoul 02447, Korea;
Yoosoo YangBiomedical Research Institute, Korea Institute of Science and Technology, Seoul 02792, Korea;
Seung Ju ParkDepartment of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon 34141, Korea;
Seulgi LeeDepartment of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon 34141, Korea;
Igor PavlovicDepartment of Chemistry, University of Zurich, 8057 Zurich, Switzerland;
Byoungjae KongDepartment of Genetic Engineering and Center for Human Interface Nanotechnology, Sungkyunkwan University, Suwon 16419, Korea;
Yong Seok JhoAsia-Pacific Center for Theoretical Physics, Pohang, Gyeongbuk 37673, Korea;
Henning J JessenInstitute of Organic Chemistry, Albert-Ludwigs-University Freiburg, Freiburg 79104, Germany;
Dae-Hyuk KweonDepartment of Genetic Engineering and Center for Human Interface Nanotechnology, Sungkyunkwan University, Suwon 16419, Korea;
Yeon-Kyun ShinDepartment of Biochemistry, Biophysics, and Molecular Biology, Iowa State University, Ames, IA 50011;
Sung Hyun KimDepartment of Biomedical Science, Graduate School, Kyung Hee University, Seoul 02447, Korea; Department of Physiology, School of Medicine, Neurodegeneration Control Research Center, Kyung Hee University, Seoul 02447, Korea; sunghyunkim@khu.ac.kr tyyoon@yonsei.ac.kr seyunkim@kaist.ac.kr.
Tae-Young YoonCenter for Nanomedicine, Institute for Basic Science (IBS), Yonsei University, Seoul 30722, Korea; Yonsei-IBS Institute, Yonsei University, Seoul 30722, Korea; sunghyunkim@khu.ac.kr tyyoon@yonsei.ac.kr seyunkim@kaist.ac.kr.
Seyun KimDepartment of Biological Sciences, Korea Advanced Institute of Science and Technology, Daejeon 34141, Korea; Korea Advanced Institute of Science and Technology Institute for the BioCentury, Korea Advanced Institute of Science and Technology, Daejeon 34141, Korea sunghyunkim@khu.ac.kr tyyoon@yonsei.ac.kr seyunkim@kaist.ac.kr.
Korea Advanced Institute of Science and Technology · KRInstitute for Basic Science · KRSungkyunkwan University · KRAsia Pacific Center for Theoretical Physics · KRIowa State University · USKorea Institute of Science and Technology · KRKyung Hee University · KRUniversity of Freiburg · DEUniversity of Zurich · CH

Funding

Regulations of SNARE-dependent membrane fusionR01GM051290 · NIGMS · UNIVERSITY OF CALIFORNIA BERKELEY · PI SHIN, YEON-KYUN · 1999 to 2019
$5.0M
NIGMS NIH HHS R01 GM051290
6 · The paper itself

Abstract

Inositol pyrophosphates such as 5-diphosphoinositol pentakisphosphate (5-IP7) are highly energetic inositol metabolites containing phosphoanhydride bonds. Although inositol pyrophosphates are known to regulate various biological events, including growth, survival, and metabolism, the molecular sites of 5-IP7 action in vesicle trafficking have remained largely elusive. We report here that elevated 5-IP7 levels, caused by overexpression of inositol hexakisphosphate (IP6) kinase 1 (IP6K1), suppressed depolarization-induced neurotransmitter release from PC12 cells. Conversely, IP6K1 depletion decreased intracellular 5-IP7 concentrations, leading to increased neurotransmitter release. Consistently, knockdown of IP6K1 in cultured hippocampal neurons augmented action potential-driven synaptic vesicle exocytosis at synapses. Using a FRET-based in vitro vesicle fusion assay, we found that 5-IP7, but not 1-IP7, exhibited significantly higher inhibitory activity toward synaptic vesicle exocytosis than IP6 Synaptotagmin 1 (Syt1), a Ca(2+) sensor essential for synaptic membrane fusion, was identified as a molecular target of 5-IP7 Notably, 5-IP7 showed a 45-fold higher binding affinity for Syt1 compared with IP6 In addition, 5-IP7-dependent inhibition of synaptic vesicle fusion was abolished by increasing Ca(2+) levels. Thus, 5-IP7 appears to act through Syt1 binding to interfere with the fusogenic activity of Ca(2+) These findings reveal a role of 5-IP7 as a potent inhibitor of Syt1 in controlling the synaptic exocytotic pathway and expand our understanding of the signaling mechanisms of inositol pyrophosphates.

Indexed as

AnimalsExocytosisHippocampusInositol PhosphatesNeuronsPC12 CellsPhosphotransferases (Phosphate Group Acceptor)RatsRats, Sprague-DawleySynaptotagmin I1-diphosphoinositol pentakisphosphateInositol PhosphatesPhosphotransferases (Phosphate Group Acceptor)Synaptotagmin ISyt1 protein, ratinositol pyrophosphatesynaptic vesicle exocytosissynaptotagmin

Identifiers

PMID27364007
PMCPMC4961143
OpenAlexW2466829468

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.