Evidence map›Paper›PMID 27363585›Full record

ArticleAmerican journal of medical genetics. Part A2016

De novo frameshift mutation in COUP-TFII (NR2F2) in human congenital diaphragmatic hernia.

Frances A High, Pooja Bhayani, Jay M Wilson, Carol J Bult, Patricia K Donahoe, Mauro Longoni

Open access · greenAbstract readCase Reports
In one paragraph

Article in American journal of medical genetics. Part A, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
4.1field-weighted citation impact, top 6% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 50 citations in OpenAlex.

  1. Review
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  5. Review
  6. Article
  7. Article
  8. Review
  9. Article
  10. COUP-TFII in Kidneys, from Embryos to Sick Adults.Diagnostics (Basel, Switzerland) · 2022
    Review
  11. Review
  12. Genetics of diaphragmatic hernia.European journal of human genetics : EJHG · 2021
    Review
  13. The Role ofGenes · 2021
    Review
  14. Review
  15. Review
  16. Review
  17. Review
  18. Article
  19. Systematic analysis of copy number variation associated with congenital diaphragmatic hernia.Proceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 5 institutions in 1 country.

Frances A HighPediatric Surgical Research Laboratories, Massachusetts General Hospital, Boston, Massachusetts.
Pooja BhayaniPediatric Surgical Research Laboratories, Massachusetts General Hospital, Boston, Massachusetts.
Jay M WilsonHarvard Medical School, Boston, Massachusetts.
Carol J BultThe Jackson Laboratory, Bar Harbor, Maine.
Patricia K DonahoePediatric Surgical Research Laboratories, Massachusetts General Hospital, Boston, Massachusetts.
Mauro LongoniPediatric Surgical Research Laboratories, Massachusetts General Hospital, Boston, Massachusetts.
Massachusetts General Hospital · USBoston Children's Hospital · USBroad Institute · USHarvard University · USJackson Laboratory · US

Funding

Shared Resource ManagementP30CA034196 · NCI · JACKSON LABORATORY · PI William Carl Skarnes · 1985 to 2026
$61.9M
THE DROSOPHILA GENETICS AND RNAI CORE (THE FLY CORE)P01HD068250 · NICHD · MASSACHUSETTS GENERAL HOSPITAL · PI CHUNG, WENDY K, DONAHOE, PATRICIA K · 2011 to 2022
$17.1M
TRAINING GRANT IN GENETICST32GM007748 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI Anne O'Donnell-Luria, Louise Wilkins-Haug · 1985 to 2026
$12.0M
NCI NIH HHS P30 CA034196NHLBI NIH HHS HHSN268201100037CNICHD NIH HHS P01 HD068250NIGMS NIH HHS T32 GM007748
6 · The paper itself

Abstract

COUP-TFII (NR2F2) is mapped to the 15q26 deletion hotspot associated with the common and highly morbid congenital diaphragmatic hernia (CDH). Conditional homozygous deletions of COUP-TFII in mice result in diaphragmatic defects analogous to the human Bochdalek-type hernia phenotype. Despite evidence from animal models however, mutations in the coding sequence of COUP-TFII have not been reported in patients, prompting the speculation that additional coding or non-coding sequences in the 15q26 locus are necessary for diaphragmatic hernias to develop. In this report, we describe a case of a patient with a heterozygous de novo COUP-TFII frameshift mutation, presenting with CDH and an atrial septal defect. The p.Pro33AlafsTer77 mutation specifically disrupts protein isoform 1 which contains the DNA binding domain. In addition, we review other COUP-TFII sequence variations and deletions that have been described in cases of CDH. We conclude that COUP-TFII mutations can cause diaphragmatic hernias, and should be included in the differential diagnosis of CDH patients, particularly those with comorbid congenital heart defects. © 2016 Wiley Periodicals, Inc.

Indexed as

Frameshift MutationGenetic Association StudiesPhenotypeAbnormalities, MultipleAllelesCOUP Transcription Factor IIDNA Mutational AnalysisFemaleGenotypeHernias, Diaphragmatic, CongenitalHumansInfant, NewbornMalePedigreePolymorphism, Single NucleotideCOUP Transcription Factor IINR2F2 protein, human15q26atrial septal defectcongenital diaphragmatic herniaCOUP-TFIIde novoNR2F2pleuroperitoneal foldstrio

Identifiers

PMID27363585
PMCPMC5003181
OpenAlexW2472372263

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.