Evidence map›Paper›PMID 27362424›Full record

ArticlePloS one2016

Low-Cost 3D Printers Enable High-Quality and Automated Sample Preparation and Molecular Detection.

Kamfai Chan, Mauricio Coen, Justin Hardick, Charlotte A Gaydos, Kah-Yat Wong, Clayton Smith, Scott A Wilson, Siva Praneeth Vayugundla, Season Wong

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
3.0field-weighted citation impact, top 9% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 50 citations in OpenAlex.

  1. Article
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  9. Review
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  13. Article
  14. Review
  15. A Rapid SARS-CoV-2 RT-PCR Assay for Low Resource Settings.Diagnostics (Basel, Switzerland) · 2020
    Article
  16. Article
  17. Diagnostics in space: will zero gravity add weight to new advances?Expert review of molecular diagnostics · 2020
    Article
  18. Magnetic Particles for Advanced Molecular Diagnosis.Materials (Basel, Switzerland) · 2019
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 1 country.

Kamfai ChanAI Biosciences, Inc., College Station, Texas, 77845, United States of America.
Mauricio CoenAI Biosciences, Inc., College Station, Texas, 77845, United States of America.
Justin HardickDivision of Infectious Diseases, Department of Medicine, Johns Hopkins University, Baltimore, Maryland, 21205, United States of America.
Charlotte A GaydosDivision of Infectious Diseases, Department of Medicine, Johns Hopkins University, Baltimore, Maryland, 21205, United States of America.
Kah-Yat WongAI Biosciences, Inc., College Station, Texas, 77845, United States of America.
Clayton SmithAI Biosciences, Inc., College Station, Texas, 77845, United States of America.
Scott A WilsonAI Biosciences, Inc., College Station, Texas, 77845, United States of America.
Siva Praneeth VayugundlaAI Biosciences, Inc., College Station, Texas, 77845, United States of America.
Season WongAI Biosciences, Inc., College Station, Texas, 77845, United States of America.
AI Biosciences (United States) · USJohns Hopkins Medicine · USJohns Hopkins University · US

Funding

A rapid, accurate, and easy-to-use diagnostic assay for STIsR43AI106239 · NIAID · AI BIOSCIENCES, INC. · PI WONG, SEASON S-S · 2014 to 2014
$225k
A Sensitive and Serotype-Specific Dengue Diagnostic Test for Low-Resource SettingR43AI107984 · NIAID · AI BIOSCIENCES, INC. · PI WONG, SEASON S-S · 2014 to 2014
$200k
NIAID NIH HHS R43 AI106239NIAID NIH HHS R43 AI107984
6 · The paper itself

Abstract

Most molecular diagnostic assays require upfront sample preparation steps to isolate the target's nucleic acids, followed by its amplification and detection using various nucleic acid amplification techniques. Because molecular diagnostic methods are generally rather difficult to perform manually without highly trained users, automated and integrated systems are highly desirable but too costly for use at point-of-care or low-resource settings. Here, we showcase the development of a low-cost and rapid nucleic acid isolation and amplification platform by modifying entry-level 3D printers that cost between $400 and $750. Our modifications consisted of replacing the extruder with a tip-comb attachment that houses magnets to conduct magnetic particle-based nucleic acid extraction. We then programmed the 3D printer to conduct motions that can perform high-quality extraction protocols. Up to 12 samples can be processed simultaneously in under 13 minutes and the efficiency of nucleic acid isolation matches well against gold-standard spin-column-based extraction technology. Additionally, we used the 3D printer's heated bed to supply heat to perform water bath-based polymerase chain reactions (PCRs). Using another attachment to hold PCR tubes, the 3D printer was programmed to automate the process of shuttling PCR tubes between water baths. By eliminating the temperature ramping needed in most commercial thermal cyclers, the run time of a 35-cycle PCR protocol was shortened by 33%. This article demonstrates that for applications in resource-limited settings, expensive nucleic acid extraction devices and thermal cyclers that are used in many central laboratories can be potentially replaced by a device modified from inexpensive entry-level 3D printers.

Indexed as

Molecular Diagnostic TechniquesNucleic Acid Amplification TechniquesPoint-of-Care SystemsPrinting, Three-DimensionalSpecimen Handling

Identifiers

PMID27362424
PMCPMC4928953
OpenAlexW2472107613

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.