Evidence map›Paper›PMID 27359114›Full record

ArticlePloS one2016

The Transient Receptor Potential (TRP) Channel Family in Colletotrichum graminicola: A Molecular and Physiological Analysis.

Mario Lange, Fabian Weihmann, Ivo Schliebner, Ralf Horbach, Holger B Deising, Stefan G R Wirsel, Edgar Peiter

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
1.4field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 14 citations in OpenAlex.

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  6. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Mario LangePlant Nutrition Laboratory, Institute of Agricultural and Nutritional Sciences (IAEW), Faculty of Natural Sciences III, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany.
Fabian WeihmannPhytopathology and Plant Protection, Institute of Agricultural and Nutritional Sciences (IAEW), Faculty of Natural Sciences III, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany.
Ivo SchliebnerPhytopathology and Plant Protection, Institute of Agricultural and Nutritional Sciences (IAEW), Faculty of Natural Sciences III, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany.
Ralf HorbachPhytopathology and Plant Protection, Institute of Agricultural and Nutritional Sciences (IAEW), Faculty of Natural Sciences III, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany.
Holger B DeisingPhytopathology and Plant Protection, Institute of Agricultural and Nutritional Sciences (IAEW), Faculty of Natural Sciences III, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany.
Stefan G R WirselPhytopathology and Plant Protection, Institute of Agricultural and Nutritional Sciences (IAEW), Faculty of Natural Sciences III, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany.
Edgar PeiterPlant Nutrition Laboratory, Institute of Agricultural and Nutritional Sciences (IAEW), Faculty of Natural Sciences III, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany.ORCID http://orcid.org/0000-0002-9104-3238
Martin Luther University Halle-Wittenberg · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Calcium (Ca2+) is a universal second messenger in all higher organisms and centrally involved in the launch of responses to environmental stimuli. Ca2+ signals in the cytosol are initiated by the activation of Ca2+ channels in the plasma membrane and/or in endomembranes. Yeast (Saccharomyces cerevisiae) contains a Ca2+-permeable channel of the TRP family, TRPY1, which is localized in the vacuolar membrane and contributes to cytosolic free Ca2+ ([Ca2+]cyt) elevations, for example in response to osmotic upshock. A TRPY1 homologue in the rice blast fungus is known to be important for growth and pathogenicity. To determine the role of the TRP channel family in the maize pathogen Colletotrichum graminicola, proteins homologous to TRPY1 were searched. This identified not one, but four genes in the C. graminicola genome, which had putative orthologs in other fungi, and which we named CgTRPF1 through 4. The topology of the CgTRPF proteins resembled that of TRPY1, albeit with a variable number of transmembrane (TM) domains additional to the six-TM-domain core and a diverse arrangement of putatively Ca2+-binding acidic motifs. All CgTRPF genes were expressed in axenic culture and throughout the infection of maize. Like TRPY1, all TRPF proteins of C. graminicola were localized intracellularly, albeit three of them were found not in large vacuoles, but co-localized in vesicular structures. Deletion strains for the CgTRPF genes were not altered in processes thought to involve Ca2+ release from internal stores, i.e. spore germination, the utilization of complex carbon sources, and the generation of tip-focussed [Ca2+]cyt spikes. Heterologous expression of CgTRPF1 through 4 in a tryp1Δ yeast mutant revealed that none of the channels mediated the release of Ca2+ in response to osmotic upshock. Accordingly, aequorin-based [Ca2+]cyt measurements of C. graminicola showed that in this fungus, osmotic upshock-triggered [Ca2+]cyt elevations were generated entirely by influx of Ca2+ from the extracellular space. Cgtrpf mutants did not show pathogenicity defects in leaf infection assays. In summary, our study reveals major differences between different fungi in the contribution of TRP channels to Ca2+-mediated signal transduction.

Indexed as

CalciumCalcium SignalingColletotrichumCytoplasmCytosolTransient Receptor Potential ChannelsVacuolesCalciumTransient Receptor Potential Channels

Identifiers

PMID27359114
PMCPMC4928787
OpenAlexW2474845096

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.