Evidence map›Paper›PMID 27358904›Full record

ArticleJournal of virology & antiviral research

HIV gp120 sequence variability associated with HAND in Hispanic Women.

Krystal Colón, Fabián Vázquez-Santiago, Vanessa Rivera-Amill, Gisela Delgado, Steven E Massey, Valerie Wojna, Richard J Noel, Loyda M Meléndez

Abstract read
In one paragraph

Article in Journal of virology & antiviral research. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
0.2field-weighted citation impact, top 47% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed, 4 citations in OpenAlex.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 2 institutions in 1 country.

Krystal ColónDepartment of Microbiology and Medical Zoology, University of Puerto Rico Medical Sciences Campus, San Juan, PR.
Fabián Vázquez-SantiagoDepartment of Basic Sciences, Microbiology Division, Ponce Health Sciences University-School of Medicine, Ponce Research Institute, Ponce PR.
Vanessa Rivera-AmillDepartment of Basic Sciences, Microbiology Division, Ponce Health Sciences University-School of Medicine, Ponce Research Institute, Ponce PR.
Gisela DelgadoDepartment of Biology, Río Piedras Campus, San Juan, PR.
Steven E MasseyDepartment of Biology, Río Piedras Campus, San Juan, PR.
Valerie WojnaSpecialized NeuroAIDS Program, University of Puerto Rico-Medical Sciences Campus, San Juan, PR, 00936, USA; Department of Internal Medicine, Neurology Division, University of Puerto Rico-Medical Sciences Campus, San Juan, PR 00936, USA.
Richard J NoelDepartment of Basic Sciences, Biochemistry Division, Ponce Health Sciences University-School of Medicine, Ponce Research Institute, Ponce PR.
Loyda M MeléndezDepartment of Microbiology and Medical Zoology, University of Puerto Rico Medical Sciences Campus, San Juan, PR.
Ponce Health Sciences University · PRUniversity of Puerto Rico, Medical Sciences Campus · PR

Funding

RISE Option III: MBRS RISE at the UPR Medical Sciences CampusR25GM061838 · NIGMS · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI CADILLA, CARMEN LYDIA · 2000 to 2021
$25.5M
TECHNOLOGIES AND RESOURCES FOR CORE LABORATORIESU54MD007587 · NIMHD · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI LUCIANO, CARLOS A., WOJNA, VALERIE · 2012 to 2018
$23.2M
VIRAL SEQUENCES IN PEDIATRIC HIV INFECTION IN PRG12MD007579 · NIMHD · PONCE SCHOOL OF MEDICINE · PI TORRES-RUIZ, JOSE A · 2012 to 2018
$15.9M
VALIDATION OF THE CLINICAL DEMENTIA RATING SCALEP20RR011126 · NCRR · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI ZORRILLA, CARMEN D · 1995 to 2009
$11.2M
TRANSLATIONAL PROTEOMICS CENTERG12MD007600 · NIMHD · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI FERNANDEZ-REPOLLET, EMMA · 2012 to 2016
$11.0M
RISE Option III: Ponce School of Medicine MBRS-RISE ProgramR25GM082406 · NIGMS · PONCE SCHOOL OF MEDICINE · PI APPLEYARD, CAROLINE B · 2008 to 2021
$9.5M
Modulation of Cystatins and Cathepsins in HIV-1 NeuropathogenesisR01MH083516 · NIMH · UNIVERSITY OF PUERTO RICO MED SCIENCES · PI MELENDEZ, LOYDA M · 2009 to 2010
$1.0M
NCRR NIH HHS P20 RR011126NIGMS NIH HHS R25 GM061838NIGMS NIH HHS R25 GM082406NIMHD NIH HHS G12 MD007579NIMHD NIH HHS G12 MD007600NIMHD NIH HHS U54 MD007587NIMH NIH HHS R01 MH083516
6 · The paper itself

Abstract

objectiveHIV-1 variants with different tropisms are associated with various neuropathologies. This study intends to determine if this correlation is determined by unique viral

methodsViral RNA was extracted from peripheral blood mononuclear cells (PBMCs) co-cultures derived from HIV-1 infected Hispanic women that had been characterized for HIV associated neurocognitive disorders (HAND).

resultsAnalyses of the C2V4 region of HIV gp120 demonstrated that increased sequence diversity correlates with cognition status as sequences derived from subjects with normal cognition exhibited less diversity than sequences derived from subjects with cognitive impairment. In addition, differences in V3 and V4 loop charges were also noted as well as differences in the N-glycosylation of the V4 region.

conclusionsOur data suggest that the genetic signature within the C2V4 region may contribute to the pathogenesis of HAND. HIV

Indexed as

CCR5CXCR4gp120HANDHIVHIV-associated neurocognitive disordersmonocyte-derived macrophages

Identifiers

PMID27358904
PMCPMC4922650
OpenAlexW2184852501

What OpenQuestion holds

Textmetadata
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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.