Evidence map›Paper›PMID 27358427›Full record

ArticleGenome biology and evolution2016

Evolution of the Calcium-Based Intracellular Signaling System.

Elodie Marchadier, Matt E Oates, Hai Fang, Philip C J Donoghue, Alistair M Hetherington, Julian Gough

Abstract read
In one paragraph

Article in Genome biology and evolution, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
  4. Article
  5. Article
  6. Review
  7. Article
  8. Review
  9. Alterations in the CaExploration of targeted anti-tumor therapy · 2021
    Article
  10. Article
  11. Calmodulin and Calmodulin Binding Proteins inInternational journal of molecular sciences · 2020
    Review
  12. Molecular Players of EF-hand Containing Calcium Signaling Event in Plants.International journal of molecular sciences · 2019
    Review
  13. Pharmacological Strategies for Manipulating Plant CaInternational journal of molecular sciences · 2018
    Review
  14. Article
  15. Frontiers in plant science · 2017
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Elodie MarchadierLife Sciences Building, University of Bristol, United Kingdom GQE-Le Moulon, INRA, Univ. Paris-Sud, CNRS, AgroParisTech, Université Paris-Saclay, 91190 Gif-sur-Yvette, France elodie.marchadier@moulon.inra.fr.
Matt E OatesDepartment of Computer Sciences, University of Bristol, United Kingdom.
Hai FangDepartment of Computer Sciences, University of Bristol, United Kingdom.
Philip C J DonoghueDepartment of Earth Sciences, University of Bristol, United Kingdom.
Alistair M HetheringtonLife Sciences Building, University of Bristol, United Kingdom.
Julian GoughDepartment of Computer Sciences, University of Bristol, United Kingdom.

Funding

Biotechnology and Biological Sciences Research Council
6 · The paper itself

Abstract

To progress our understanding of molecular evolution from a collection of well-studied genes toward the level of the cell, we must consider whole systems. Here, we reveal the evolution of an important intracellular signaling system. The calcium-signaling toolkit is made up of different multidomain proteins that have undergone duplication, recombination, sequence divergence, and selection. The picture of evolution, considering the repertoire of proteins in the toolkit of both extant organisms and ancestors, is radically different from that of other systems. In eukaryotes, the repertoire increased in both abundance and diversity at a far greater rate than general genomic expansion. We describe how calcium-based intracellular signaling evolution differs not only in rate but in nature, and how this correlates with the disparity of plants and animals.

Indexed as

Evolution, MolecularAnimalsCalcium-Binding ProteinsCalcium SignalingEukaryotaCalcium-Binding Proteinscalcium signalingdiversificationevolutionprotein architecturespecialization

Identifiers

PMID27358427
PMCPMC4987107

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.