Evidence map›Paper›PMID 27358356›Full record

ArticleClinical infectious diseases : an official publication of the Infectious Diseases Society of America2016

A Clinical Decision Tree to Predict Whether a Bacteremic Patient Is Infected With an Extended-Spectrum β-Lactamase-Producing Organism.

Katherine E Goodman, Justin Lessler, Sara E Cosgrove, Anthony D Harris, Ebbing Lautenbach, Jennifer H Han, Aaron M Milstone, Colin J Massey, Pranita D Tamma, Antibacterial Resistance Leadership Group

Registry-linked trialOpen access · bronzeAbstract read
In one paragraph

Article in Clinical infectious diseases : an official publication of the Infectious Diseases Society of America, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT04699981 (Can the Relative Fecal Abundance of BLSE and the Digestive Microbiota be Predictive of the Risk of Infection in a Carrier Patient?), which is not on this map. Cited by 87 papers, 3 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
87citing papers in PubMed, 3 pooled it
8.8field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT04699981 naunknown statusnot on this mapstarted 2022, after this paper: background citation

Can the Relative Fecal Abundance of BLSE and the Digestive Microbiota be Predictive of the Risk of Infection in a Carrier Patient?

TypeinterventionalSponsorFondation Hôpital Saint-JosephRan2022 to 2024Enrolled200ConditionsEnterobacteria InfectionsArmsControl (Patients colonized rectally with ESBL-producing enterobacteria without antibiotic pressure), Case (Patients colonized rectally with ESBL-producing enterobacteriaceae, with antibiotic pressure)
3 · Its place in the literature

Who cites it

87 citing papers in PubMed, 3 syntheses or guidelines pooled it, 173 citations in OpenAlex.

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  18. Epidemiology ofAntimicrobial agents and chemotherapy · 2024
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27 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 1 country.

Katherine E GoodmanDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health.
Justin LesslerDepartment of Epidemiology, Johns Hopkins Bloomberg School of Public Health.
Sara E CosgroveDepartment of Medicine, Division of Infectious Diseases, Johns Hopkins University School of Medicine.
Anthony D HarrisDepartment of Epidemiology and Public Health, University of Maryland School of Medicine, Baltimore.
Ebbing LautenbachDepartment of Medicine, Division of Infectious Diseases, University of Pennsylvania School of Medicine, Philadelphia.
Jennifer H HanDepartment of Medicine, Division of Infectious Diseases, University of Pennsylvania School of Medicine, Philadelphia.
Aaron M MilstoneDepartment of Pediatrics, Division of Infectious Diseases.
Colin J MasseyDepartment of Medicine, Johns Hopkins University School of Medicine, Baltimore, Maryland.
Pranita D TammaDepartment of Pediatrics, Division of Infectious Diseases.
Antibacterial Resistance Leadership Group
Johns Hopkins University · USOffice of Infectious Diseases · USUniversity of Pennsylvania · USJohns Hopkins Medicine · USUniversity of Maryland, Baltimore · US

Funding

Antibacterial Resistance Leadership Group (ARLG)UM1AI104681 · NIAID · DUKE UNIVERSITY · PI Vance G. Fowler, Henry F HENRY CHAMBERS · 2013 to 2026
$180.8M
K24 Clinical Research in Antimicrobial Resistance and Hospital EpidemiologyK24AI079040 · NIAID · UNIVERSITY OF MARYLAND BALTIMORE · PI HARRIS, ANTHONY D · 2009 to 2018
$1.8M
Mentoring and patient-oriented research in antimicrobial resistanceK24AI080942 · NIAID · UNIVERSITY OF PENNSYLVANIA · PI LAUTENBACH, EBBING · 2009 to 2013
$853k
NIAID NIH HHS K24 AI079040NIAID NIH HHS K24 AI080942NIAID NIH HHS UM1 AI104681
6 · The paper itself

Abstract

backgroundTimely identification of extended-spectrum β-lactamase (ESBL) bacteremia can improve clinical outcomes while minimizing unnecessary use of broad-spectrum antibiotics, including carbapenems. However, most clinical microbiology laboratories currently require at least 24 additional hours from the time of microbial genus and species identification to confirm ESBL production. Our objective was to develop a user-friendly decision tree to predict which organisms are ESBL producing, to guide appropriate antibiotic therapy.

methodsWe included patients ≥18 years of age with bacteremia due to Escherichia coli or Klebsiella species from October 2008 to March 2015 at Johns Hopkins Hospital. Isolates with ceftriaxone minimum inhibitory concentrations ≥2 µg/mL underwent ESBL confirmatory testing. Recursive partitioning was used to generate a decision tree to determine the likelihood that a bacteremic patient was infected with an ESBL producer. Discrimination of the original and cross-validated models was evaluated using receiver operating characteristic curves and by calculation of C-statistics.

resultsA total of 1288 patients with bacteremia met eligibility criteria. For 194 patients (15%), bacteremia was due to a confirmed ESBL producer. The final classification tree for predicting ESBL-positive bacteremia included 5 predictors: history of ESBL colonization/infection, chronic indwelling vascular hardware, age ≥43 years, recent hospitalization in an ESBL high-burden region, and ≥6 days of antibiotic exposure in the prior 6 months. The decision tree's positive and negative predictive values were 90.8% and 91.9%, respectively.

conclusionsOur findings suggest that a clinical decision tree can be used to estimate a bacteremic patient's likelihood of infection with ESBL-producing bacteria. Recursive partitioning offers a practical, user-friendly approach for addressing important diagnostic questions.

Indexed as

beta-Lactam ResistanceDecision Support Systems, ClinicalDecision TreesModels, StatisticalAdultAgedAnti-Bacterial AgentsBacteremiabeta-LactamasesEscherichia coliEscherichia coli InfectionsFemaleHumansKlebsiellaKlebsiella InfectionsMaleAnti-Bacterial Agentsbeta-LactamasesbacteremiacarbapenemESBLmachine learningprediction

Identifiers

PMID27358356
PMCPMC5019284
OpenAlexW2468793326

What OpenQuestion holds

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.