ArticleScientific reports2016
Unlocking the bacterial and fungal communities assemblages of sugarcane microbiome.
Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 126 papers.
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Who cites it
126 citing papers in PubMed, 368 citations in OpenAlex.
- It takes a village: how plant-associated bacterial communities socialise to shape plant growth and health.Essays in biochemistry · 2026Review
- Soil and Genotype Shape the Sugarcane Phytobiome for Enhanced Environmental Adaptation.Environmental microbiology reports · 2026Article
- Microbial assembly among plant parts of a tropical tree in different habitats and seasons.Microbiology spectrum · 2026Article
- Interspecies interactions among sugarcane-associated bacteria and their impact on plant growth promotion traits.Frontiers in microbiology · 2026Article
- Synthetic microbiomes in bioengineered rhizospheres: new frontiers for climate-resilient agriculture.Frontiers in microbiology · 2026Review
- Water Deficit Stress Alters the Microbial Community Assembly, Structure, and Sources in Corn and Sugar Beet.Environmental microbiology · 2025Article
- Dynamics of rice microbiome: insights into functional diversity, environmental influences, response to stress, and applications.World journal of microbiology & biotechnology · 2025Review
- Niches and Genotypes Determine the Diversity and Composition of Microbiomes After Herbicide Treatment inPlants (Basel, Switzerland) · 2025Article
- Deciphering the microbiome dynamics in an effective banana Fusarium wilt biocontrol interaction system.3 Biotech · 2025Article
- Microbiome and Metabolome Illustrate the Correlations Between Endophytes and Flavor Metabolites inInternational journal of molecular sciences · 2025Article
- Host selection is not a universal driver of phyllosphere community assembly among ecologically similar native New Zealand plant species.Microbiome · 2025Article
- Plant-microbe interactions: PGPM as microbial inoculants/biofertilizers for sustaining crop productivity and soil fertility.Current research in microbial sciences · 2025Review
- National-scale distribution of protists associated with sorghum leaves and roots.Environmental microbiology reports · 2024Article
- Growth promotion and modulation of the soybean microbiome INTACTA RR PRO with the application of the fungi Trichoderma harzianum and Purpureocillum lilacinum.Scientific reports · 2024Article
- Fungal Diversity and Gibberellin Hormones Associated with Long Whips of Smut-Infected Sugarcanes.International journal of molecular sciences · 2024Article
- Diversity of bacteria of the genus Sphingomonas associated with sugarcane (Saccharum spp.) culm apoplast fluid and their agrotechnological potential.World journal of microbiology & biotechnology · 2024Article
- Natural Occurrence of Fungi and Aflatoxins Associated Sugarcane Plant and Sugarcane Juice and Their Control.Indian journal of microbiology · 2024Article
- Stable, fluorescent markers for tracking synthetic communities and assembly dynamics.Microbiome · 2024Article
- Nitrospirillum viridazoti sp. nov., an Efficient Nitrogen-Fixing Species Isolated from Grasses.Current microbiology · 2024Article
- Unraveling endophytic diversity in dioecious Siraitia grosvenorii: implications for mogroside production.Applied microbiology and biotechnology · 2024Article
66 more citing papers are in PubMed but not listed here.
Corrections and comments
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Authors and funding
12 authors at 4 institutions in 2 countries.
Funding
No grant is acknowledged in the PubMed record.
Abstract
Plant microbiome and its manipulation herald a new era for plant biotechnology with the potential to benefit sustainable crop production. However, studies evaluating the diversity, structure and impact of the microbiota in economic important crops are still rare. Here we describe a comprehensive inventory of the structure and assemblage of the bacterial and fungal communities associated with sugarcane. Our analysis identified 23,811 bacterial OTUs and an unexpected 11,727 fungal OTUs inhabiting the endophytic and exophytic compartments of roots, shoots, and leaves. These communities originate primarily from native soil around plants and colonize plant organs in distinct patterns. The sample type is the primary driver of fungal community assemblage, and the organ compartment plays a major role in bacterial community assemblage. We identified core bacterial and fungal communities composed of less than 20% of the total microbial richness but accounting for over 90% of the total microbial relative abundance. The roots showed 89 core bacterial families, 19 of which accounted for 44% of the total relative abundance. Stalks are dominated by groups of yeasts that represent over 12% of total relative abundance. The core microbiome described here comprise groups whose biological role underlies important traits in plant growth and fermentative processes.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.