Evidence map›Paper›PMID 27353947›Full record

ArticleScientific reports2016

Next generation sequencing based identification of disease-associated mutations in Swiss patients with retinal dystrophies.

Amit Tiwari, Angela Bahr, Luzy Bähr, Johannes Fleischhauer, Martin S Zinkernagel, Niklas Winkler, Daniel Barthelmes, Lieselotte Berger, Christina Gerth-Kahlert, John Neidhardt and 1 more

Open access · goldAbstract read
In one paragraph

Article in Scientific reports, 2016. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 50 papers.

0numbers the graph read from it
0cells of the map it votes in
50citing papers in PubMed
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

50 citing papers in PubMed, 76 citations in OpenAlex.

  1. Review
  2. Article
  3. Cone-Rod DystrophyDiagnostics (Basel, Switzerland) · 2026
    Article
  4. Article
  5. Review
  6. Article
  7. Autosomal Dominant RP1 c.2613dupA (p.Arg872Thrfs*2) Variant Retinitis Pigmentosa Shows Linear Loss of the Ellipsoid Zone over Time with Highly Variable Phenotype.Ophthalmologica. Journal international d'ophtalmologie. International journal of ophthalmology. Zeitschrift fur Augenheilkunde · 2025
    Article
  8. Article
  9. Article
  10. Unearthing FLVCR1a: tracing the path to a vital cellular transporter.Cellular and molecular life sciences : CMLS · 2024
    Review
  11. Whole genome sequencing for inherited retinal diseases in the Korean National Project of Bio Big Data.Graefe's archive for clinical and experimental ophthalmology = Albrecht von Graefes Archiv fur klinische und experimentelle Ophthalmologie · 2024
    Article
  12. Mutational Profile and Retinal Phenotypes ofJournal of ophthalmology · 2024
    Article
  13. Clinical and Molecular Aspects of C2orf71/PCARE in Retinal Diseases.International journal of molecular sciences · 2023
    Review
  14. Article
  15. Article
  16. Article
  17. Compound dominant-null heterozygosity in a family withAmerican journal of ophthalmology case reports · 2022
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 3 institutions in 1 country.

Amit TiwariInstitute of Medical Molecular Genetics, University of Zürich, Wagistrasse 12, CH-8952, Schlieren, Switzerland.
Angela BahrInstitute of Medical Molecular Genetics, University of Zürich, Wagistrasse 12, CH-8952, Schlieren, Switzerland.
Luzy BährInstitute of Medical Molecular Genetics, University of Zürich, Wagistrasse 12, CH-8952, Schlieren, Switzerland.
Johannes FleischhauerDepartment of Ophthalmology, University Hospital Zürich and University of Zürich, Zürich, Switzerland.
Martin S ZinkernagelDepartment of Ophthalmology, Inselspital, Bern University Hospital, University of Bern, Switzerland.
Niklas WinklerDepartment of Ophthalmology, University Hospital Zürich and University of Zürich, Zürich, Switzerland.
Daniel BarthelmesDepartment of Ophthalmology, University Hospital Zürich and University of Zürich, Zürich, Switzerland.
Lieselotte BergerDepartment of Ophthalmology, Inselspital, Bern University Hospital, University of Bern, Switzerland.
Christina Gerth-KahlertDepartment of Ophthalmology, University Hospital Zürich and University of Zürich, Zürich, Switzerland.
John NeidhardtInstitute of Medical Molecular Genetics, University of Zürich, Wagistrasse 12, CH-8952, Schlieren, Switzerland.
Wolfgang BergerInstitute of Medical Molecular Genetics, University of Zürich, Wagistrasse 12, CH-8952, Schlieren, Switzerland.
University of Zurich · CHUniversity of Bern · CHSwiss Integrative Center for Human Health · CH

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Inherited monogenic diseases of the retina and vitreous affect approximately 1 in 2000 individuals. They are characterized by tremendous genetic heterogeneity and clinical variability involving mutations in approximately 250 genes and more than 20 different clinical phenotypes. Clinical manifestations of retinal dystrophies (RDs) range from mild retinal dysfunctions to severe congenital forms of blindness. A detailed clinical diagnosis and the identification of causative mutations are crucial for genetic counseling of affected patients and their families, for understanding genotype-phenotype correlations and developing therapeutic approaches. Using whole exome sequencing (WES) we have established a reliable and efficient high-throughput analysis pipeline to identify disease-causing mutations. Our data indicate that this approach enables us to genetically diagnose approximately 64% of the patients (n = 58) with variant(s) in known disease-associated genes. We report 20 novel and 26 recurrent variants in genes associated with RDs. We also identified a novel phenotype for mutations in C2orf71 and provide functional evidence for exon skipping due to a splice-site variant identified in FLVCR1. In conclusion, WES can rapidly identify variants in various families affected with different forms of RDs. Our study also expands the clinical and allelic spectrum of genes associated with RDs in the Swiss population.

Indexed as

MutationExome SequencingEye ProteinsFemaleHigh-Throughput Nucleotide SequencingHumansMaleMembrane Transport ProteinsReceptors, VirusRetinal DystrophiesSwitzerlandEye ProteinsFLVCR1 protein, humanMembrane Transport ProteinsPCARE protein, humanReceptors, Virus

Identifiers

PMID27353947
PMCPMC4926080
OpenAlexW2462815544

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.